Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-85P-201ENST00000605989 107 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 uc_338.5-201ENST00000611839 155 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AL161629.2-201ENST00000615347 275 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 SNORD81.2-201ENST00000365153 76 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 RNA5SP252-201ENST00000391131 119 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 HMGB1P9-201ENST00000429856 646 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC133134.1-201ENST00000466800 359 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 HMGN2P13-201ENST00000476476 274 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-864P-201ENST00000516256 108 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-1332P-201ENST00000516666 104 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-256P-201ENST00000516747 97 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 SCOCP1-201ENST00000554676 349 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AL022345.1-201ENST00000607292 135 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 AC099654.5-201ENST00000636479 350 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT28Q7Z3Y7 MTND5P6-201ENST00000422338 1798 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC138393.1-203ENST00000327086 343 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 RAP1BP3-201ENST00000407180 549 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 VN1R36P-201ENST00000414936 291 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC096638.1-201ENST00000444678 216 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 BTF3P15-201ENST00000455606 336 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 RNU7-138P-201ENST00000459479 64 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 RPS26P21-201ENST00000475397 348 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC103851.1-201ENST00000506833 274 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC068657.1-201ENST00000520807 306 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC021269.2-201ENST00000532318 330 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AP000889.2-201ENST00000532684 490 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC025423.5-201ENST00000550230 219 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 MIR3942-201ENST00000585264 109 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 HMGN2P15-201ENST00000585707 270 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 OR1M4P-201ENST00000589199 287 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 APOOP1-201ENST00000604695 592 ntBASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT28Q7Z3Y7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 Y_RNA.164-201ENST00000363709 102 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 Y_RNA.263-201ENST00000364659 114 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 Y_RNA.356-201ENST00000365475 113 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-214P-201ENST00000384130 107 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 MTND1P11-201ENST00000456661 876 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 RPS27AP9-201ENST00000477681 438 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 RPS27AP10-201ENST00000496103 208 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 MIR4506-201ENST00000584693 77 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AL117336.2-201ENST00000602435 335 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 AC087045.1-201ENST00000605856 382 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 uc_338.15-201ENST00000615470 191 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 RMST_7.1-201ENST00000621935 268 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 ADAM3A-203ENST00000461344 2157 ntBASIC3.35□□□□□ -1.87
KRT28Q7Z3Y7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 ZNF72P-201ENST00000425869 1908 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-37P-201ENST00000362692 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 Y_RNA.212-201ENST00000364177 102 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-11P-201ENST00000364234 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-898P-201ENST00000365627 104 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-25P-201ENST00000383873 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-1-201ENST00000383898 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-48P-201ENST00000384161 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-36P-201ENST00000384172 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-4P-201ENST00000384205 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-5P-201ENST00000384238 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-3P-201ENST00000384314 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-16P-201ENST00000384385 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-15P-201ENST00000384534 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms