Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AL158211.4-201ENST00000606988 584 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 AC034229.4-201ENST00000607861 441 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 Z82243.1-201ENST00000609432 473 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 AC092447.10-201ENST00000620607 1652 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 SNORD95.1-201ENST00000364099 68 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.21□□□□□ -2.38
NUP188Q5SRE5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.21□□□□□ -2.38
NUP188Q5SRE5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.21□□□□□ -2.38
NUP188Q5SRE5 OR2AQ1P-201ENST00000451972 200 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 RPL7P43-201ENST00000478876 753 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 CYCTP-201ENST00000504253 315 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.21□□□□□ -2.38
NUP188Q5SRE5 AC108676.2-201ENST00000605225 163 ntBASIC0.21□□□□□ -2.38
NUP188Q5SRE5 FARSBP1-201ENST00000435808 1778 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RNU6-673P-201ENST00000365084 104 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RNU6-1054P-201ENST00000411293 104 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RNU6-333P-201ENST00000459117 107 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RPL32P14-201ENST00000463196 378 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RNU6-1092P-201ENST00000516955 87 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.2□□□□□ -2.38
NUP188Q5SRE5 BPTFP1-201ENST00000579209 492 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 AC112220.2-201ENST00000605513 533 ntBASIC0.2□□□□□ -2.38
NUP188Q5SRE5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.2□□□□□ -2.38
NUP188Q5SRE5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
NUP188Q5SRE5 RNU4-12P-201ENST00000365233 139 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 RNU6-43P-201ENST00000384302 107 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 MIR194-1-201ENST00000384892 85 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 RNU6-528P-201ENST00000516926 100 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC068620.3-201ENST00000602749 560 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 RPL21P136-201ENST00000605378 396 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC012557.2-201ENST00000605919 418 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC093913.1-201ENST00000614178 329 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 uc_338.15-201ENST00000615470 191 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC004009.2-201ENST00000623016 728 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 AC009950.2-201ENST00000636548 183 ntBASIC0.19□□□□□ -2.38
NUP188Q5SRE5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.19□□□□□ -2.38
NUP188Q5SRE5 RNA5SP361-201ENST00000362686 118 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 RNU6-529P-201ENST00000363383 104 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 RPL26P27-201ENST00000414397 437 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 RPL30P1-201ENST00000488676 339 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AC093259.1-201ENST00000509755 300 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 MIR3664-201ENST00000579074 99 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 MIR605-201ENST00000385078 83 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 RPL31P3-201ENST00000458430 332 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 BET1P1-201ENST00000482276 359 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 MTCYBP40-201ENST00000509390 1135 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 MIR4493-201ENST00000584016 73 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AP001180.6-201ENST00000584918 159 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AC004908.3-201ENST00000610248 625 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 Pinc.1-201ENST00000616452 154 ntBASIC0.18□□□□□ -2.38
NUP188Q5SRE5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.18□□□□□ -2.38
NUP188Q5SRE5 AC023934.1-201ENST00000574529 2389 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 AL159152.1-201ENST00000635019 2587 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 AL391994.1-201ENST00000254724 282 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 AC099677.2-201ENST00000436385 175 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.17□□□□□ -2.38
NUP188Q5SRE5 BNIP3P24-201ENST00000593398 557 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 AL357094.1-201ENST00000603845 844 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 AL133445.2-201ENST00000611191 527 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 AC010133.1-201ENST00000615809 842 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 MIR6516-201ENST00000630554 81 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 PCMTD1P7-201ENST00000634506 357 ntBASIC0.17□□□□□ -2.38
NUP188Q5SRE5 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 PNRC2P1-201ENST00000423940 420 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC092423.1-201ENST00000430165 186 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AL096829.2-201ENST00000446582 742 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 PDCD5P2-201ENST00000507570 312 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 RNA5SP168-201ENST00000516642 112 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC087897.1-201ENST00000550134 156 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 MIR3169-201ENST00000578032 83 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 BNIP3P26-201ENST00000600827 554 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC091057.3-201ENST00000602684 733 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms