Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC004944.1-201ENST00000517807 3059 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SLC44A4Q53GD3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC44A4Q53GD3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.4□□□□□ -1.86
SLC44A4Q53GD3 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.86
SLC44A4Q53GD3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 SNORA5B-201ENST00000363786 132 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 RNU6-196P-201ENST00000384315 107 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 SNORA44-201ENST00000384584 132 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 RNU6-95P-201ENST00000384697 107 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AL445529.1-201ENST00000398713 389 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 SNORD56-201ENST00000413522 71 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 MCFD2P1-201ENST00000417812 300 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 ATG3P1-201ENST00000419507 911 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC018865.2-201ENST00000423631 129 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AL353705.1-201ENST00000433468 480 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AL714022.1-201ENST00000439897 151 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC025750.2-201ENST00000442609 450 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 MTATP8P1-201ENST00000467115 207 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 RPL23AP45-201ENST00000476406 468 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC026782.1-201ENST00000512952 449 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.661-201ENST00000516003 99 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 RNU6-976P-201ENST00000516086 111 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC026333.2-201ENST00000542164 106 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 LINC00933-203ENST00000559812 219 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 MIR4503-201ENST00000582187 83 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC093732.2-201ENST00000607950 274 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 AC011890.2-201ENST00000613393 294 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 MTND5P7-201ENST00000413558 1798 ntBASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A4Q53GD3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AL035425.3-201ENST00000564206 4996 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 RNA5SP383-201ENST00000362934 120 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 RNU6-128P-201ENST00000383976 107 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 RNU6-214P-201ENST00000384130 107 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 RNU6-306P-201ENST00000384617 107 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 MRPL42P3-201ENST00000401492 326 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 BPY2DP-201ENST00000422208 265 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AC006989.1-201ENST00000427212 131 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 BTF3P15-201ENST00000455606 336 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AP002404.1-201ENST00000532005 451 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 BNIP3P16-201ENST00000589779 534 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AC018462.2-201ENST00000605375 395 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AL161629.2-201ENST00000615347 275 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
SLC44A4Q53GD3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU6-593P-201ENST00000364716 112 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU6-26P-201ENST00000383985 107 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.527-201ENST00000384573 102 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU6-331P-201ENST00000384724 107 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU6-985P-201ENST00000410182 104 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AL096701.2-201ENST00000416920 238 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU7-187P-201ENST00000458985 68 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RN7SL863P-201ENST00000462370 296 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RN7SL429P-201ENST00000479090 223 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RN7SL489P-201ENST00000486185 223 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RN7SL327P-201ENST00000488659 223 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC096745.1-201ENST00000509945 370 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU6-581P-201ENST00000516214 105 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms