Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC034114.1-201ENST00000520293 285 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40BQ12829 AP001893.2-201ENST00000526949 202 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC110760.3-201ENST00000598794 467 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 ELOCP5-201ENST00000604924 333 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RAB40BQ12829 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
RAB40BQ12829 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC022079.1-201ENST00000621546 602 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 U4.7-201ENST00000638126 106 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RAB40BQ12829 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40BQ12829 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40BQ12829 AL596028.1-201ENST00000326971 197 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 Y_RNA.159-201ENST00000363674 87 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RNU6-1127P-201ENST00000384580 107 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 CBX3P9-201ENST00000402326 552 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RNU2-29P-201ENST00000410423 189 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.86□□□□□ -2.11
RAB40BQ12829 MTCO2P34-201ENST00000421994 607 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RPL39P29-201ENST00000447779 157 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC105417.1-201ENST00000514691 285 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RN7SKP298-201ENST00000515950 94 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RNU2-69P-201ENST00000516061 100 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RNA5SP281-201ENST00000516504 135 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 Y_RNA.688-201ENST00000516565 95 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40BQ12829 AC091135.1-201ENST00000585943 307 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AL031274.2-201ENST00000599419 203 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AL136363.2-201ENST00000604173 851 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AC009090.3-201ENST00000616553 565 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 AC136475.10-201ENST00000620253 385 ntBASIC1.86□□□□□ -2.11
RAB40BQ12829 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB40BQ12829 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RAB40BQ12829 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB40BQ12829 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RAB40BQ12829 RNU6-105P-201ENST00000363909 104 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 U3.13-201ENST00000364804 214 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 Y_RNA.480-201ENST00000384364 102 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 MIR544A-201ENST00000384855 91 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 SNORA16.2-201ENST00000390991 127 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 RNU6-1245P-201ENST00000411130 106 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC009963.1-201ENST00000417265 157 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AL139413.1-201ENST00000421309 217 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC073464.1-201ENST00000429823 534 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 MTCO2P16-201ENST00000436962 677 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC007969.2-201ENST00000441891 191 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AL356010.1-201ENST00000456364 102 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 SNRPFP3-201ENST00000457792 225 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 RPL31P3-201ENST00000458430 332 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 SCARNA18-201ENST00000459004 134 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC107032.1-201ENST00000485945 480 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 AC117532.1-201ENST00000514638 323 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 RNU6-377P-201ENST00000515965 102 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 RNA5SP137-201ENST00000516833 135 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RAB40BQ12829 AC107953.1-201ENST00000522216 297 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AP005435.4-201ENST00000529514 284 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC023050.3-201ENST00000541142 333 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC006362.1-201ENST00000567392 174 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40BQ12829 AC008752.3-201ENST00000588113 712 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 AC090582.1-201ENST00000636321 199 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.85□□□□□ -2.11
RAB40BQ12829 MTND4P14-201ENST00000435799 1354 ntBASIC1.85□□□□□ -2.11
RAB40BQ12829 snoU2_19.1-201ENST00000362361 80 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 RNU6-552P-201ENST00000362869 119 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 RNU5A-6P-201ENST00000384136 116 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RAB40BQ12829 RNA5SP508-201ENST00000411327 119 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.84□□□□□ -2.11
RAB40BQ12829 HMGN2P38-201ENST00000423806 265 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.84□□□□□ -2.11
RAB40BQ12829 AL353752.1-201ENST00000454946 260 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40BQ12829 RNU7-63P-201ENST00000459054 62 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms