Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 Y_RNA.422-201ENST00000384054 114 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 RNU6-198P-201ENST00000384258 104 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 Y_RNA.496-201ENST00000384444 101 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.76□□□□□ -1.97
SEC61A1P61619 AC096664.2-201ENST00000411843 406 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.76□□□□□ -1.97
SEC61A1P61619 AC098614.2-201ENST00000426040 255 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 TOMM20P4-201ENST00000427861 435 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AL133396.1-201ENST00000432048 687 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AL353997.1-201ENST00000432936 108 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.76□□□□□ -1.97
SEC61A1P61619 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.76□□□□□ -1.97
SEC61A1P61619 CYCSP32-201ENST00000440548 321 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 SNORA74D-201ENST00000516404 141 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 Y_RNA.687-201ENST00000516558 91 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 RNU6-711P-201ENST00000517255 106 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 MIR4474-201ENST00000579189 78 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.76□□□□□ -1.97
SEC61A1P61619 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.76□□□□□ -1.97
SEC61A1P61619 AC083806.3-201ENST00000614016 455 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AL161629.2-201ENST00000615347 275 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AC090617.7-201ENST00000623952 126 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 AC091903.1-201ENST00000624322 454 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
SEC61A1P61619 CDC27P3-201ENST00000635418 1910 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.75□□□□□ -1.97
SEC61A1P61619 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
SEC61A1P61619 RPL9P7-201ENST00000330965 580 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 RNU1-70P-201ENST00000362618 164 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 RNU6-933P-201ENST00000384424 107 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SEC61A1P61619 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 MCFD2P1-201ENST00000417812 300 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 HMGN2P30-201ENST00000423237 256 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 MRPS18CP6-201ENST00000423587 223 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 AL513043.1-201ENST00000439124 535 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 NDUFB1P2-201ENST00000449477 176 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 GSTA11P-201ENST00000452866 669 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 RPL9P9-202ENST00000466501 579 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 RN7SL807P-201ENST00000470923 297 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 RN7SL504P-201ENST00000494496 287 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.75□□□□□ -1.97
SEC61A1P61619 SNORA31.1-201ENST00000515993 133 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 SNORA31.5-201ENST00000516190 133 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A1P61619 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.75□□□□□ -1.97
SEC61A1P61619 MIR5680-201ENST00000577577 84 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AL645944.1-201ENST00000603857 493 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AC009314.1-201ENST00000603871 304 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 AP001836.1-201ENST00000604675 523 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SEC61A1P61619 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SEC61A1P61619 FAM35BP-202ENST00000497389 3337 ntBASIC2.75□□□□□ -1.97
SEC61A1P61619 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SEC61A1P61619 SNORA38.1-201ENST00000364172 131 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 RNU1-73P-201ENST00000383971 164 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 RNY1P14-201ENST00000384426 108 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 MIR521-1-201ENST00000384902 87 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 MIR483-201ENST00000385070 76 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 RNU6-1106P-201ENST00000390845 107 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 U3.19-201ENST00000390893 196 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 AL356057.3-201ENST00000402607 340 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 AL513475.1-201ENST00000406602 315 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AC018865.2-201ENST00000423631 129 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.74□□□□□ -1.97
SEC61A1P61619 RPL26P9-201ENST00000457466 433 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 AK3P2-201ENST00000507976 429 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 RN7SKP43-201ENST00000516173 320 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.74□□□□□ -1.97
SEC61A1P61619 CBX3P8-201ENST00000532412 525 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 CYCSP39-201ENST00000565821 309 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AC136443.5-201ENST00000603741 370 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AC005014.2-201ENST00000607795 599 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 AC091925.1-201ENST00000623204 462 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 GABRG2-229ENST00000641017 3628 ntBASIC2.74□□□□□ -1.97
SEC61A1P61619 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SEC61A1P61619 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SEC61A1P61619 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SEC61A1P61619 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
SEC61A1P61619 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.73□□□□□ -1.97
SEC61A1P61619 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SEC61A1P61619 AC022336.2-201ENST00000568966 2538 ntBASIC2.73□□□□□ -1.97
SEC61A1P61619 MAPK10-322ENST00000641485 4530 ntBASIC2.73□□□□□ -1.97
SEC61A1P61619 Y_RNA.80-201ENST00000362996 102 ntBASIC2.73□□□□□ -1.97
SEC61A1P61619 Y_RNA.145-201ENST00000363527 102 ntBASIC2.73□□□□□ -1.97
SEC61A1P61619 Y_RNA.364-201ENST00000365532 101 ntBASIC2.73□□□□□ -1.97
SEC61A1P61619 RNU6-898P-201ENST00000365627 104 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms