Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.62□□□□□ -2.15
VSX2P58304 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.62□□□□□ -2.15
VSX2P58304 CYCSP46-201ENST00000423569 204 ntBASIC1.62□□□□□ -2.15
VSX2P58304 MTCYBP5-201ENST00000423752 1135 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.62□□□□□ -2.15
VSX2P58304 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.62□□□□□ -2.15
VSX2P58304 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.62□□□□□ -2.15
VSX2P58304 ISCA1P6-201ENST00000427740 390 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.62□□□□□ -2.15
VSX2P58304 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.62□□□□□ -2.15
VSX2P58304 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.62□□□□□ -2.15
VSX2P58304 HMGB1P18-201ENST00000438801 619 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.62□□□□□ -2.15
VSX2P58304 AL022238.1-201ENST00000442557 355 ntBASIC1.62□□□□□ -2.15
VSX2P58304 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
VSX2P58304 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.62□□□□□ -2.15
VSX2P58304 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.62□□□□□ -2.15
VSX2P58304 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.62□□□□□ -2.15
VSX2P58304 RNA5SP137-201ENST00000516833 135 ntBASIC1.62□□□□□ -2.15
VSX2P58304 RNU6-685P-201ENST00000517088 95 ntBASIC1.62□□□□□ -2.15
VSX2P58304 RNU6-667P-201ENST00000517186 102 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AC060788.1-201ENST00000521318 469 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AP004607.1-201ENST00000524456 203 ntBASIC1.62□□□□□ -2.15
VSX2P58304 NDUFA5P6-201ENST00000542110 379 ntBASIC1.62□□□□□ -2.15
VSX2P58304 IMMP1LP2-201ENST00000552954 492 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AC104581.2-201ENST00000572227 430 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AC078795.2-201ENST00000602835 1252 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AC092354.1-201ENST00000606057 376 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AC012360.2-201ENST00000609349 391 ntBASIC1.62□□□□□ -2.15
VSX2P58304 Z82243.1-201ENST00000609432 473 ntBASIC1.62□□□□□ -2.15
VSX2P58304 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.62□□□□□ -2.15
VSX2P58304 AF246928.1-201ENST00000623768 87 ntBASIC1.62□□□□□ -2.15
VSX2P58304 MTND4P23-201ENST00000447723 1363 ntBASIC1.61□□□□□ -2.15
VSX2P58304 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.61□□□□□ -2.15
VSX2P58304 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VSX2P58304 SNORD56.1-201ENST00000362913 68 ntBASIC1.61□□□□□ -2.15
VSX2P58304 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
VSX2P58304 RNU6-116P-201ENST00000384042 109 ntBASIC1.61□□□□□ -2.15
VSX2P58304 RNU6-297P-201ENST00000384636 107 ntBASIC1.61□□□□□ -2.15
VSX2P58304 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
VSX2P58304 RNU2-3P-201ENST00000410144 191 ntBASIC1.61□□□□□ -2.15
VSX2P58304 RNA5SP450-201ENST00000411206 102 ntBASIC1.61□□□□□ -2.15
VSX2P58304 CYCSP33-201ENST00000414485 327 ntBASIC1.61□□□□□ -2.15
VSX2P58304 HMGB1P31-201ENST00000437242 427 ntBASIC1.61□□□□□ -2.15
VSX2P58304 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.61□□□□□ -2.15
VSX2P58304 MTND1P30-201ENST00000441241 901 ntBASIC1.61□□□□□ -2.15
VSX2P58304 GAPDHP17-201ENST00000449858 1001 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AL133217.1-201ENST00000450980 425 ntBASIC1.61□□□□□ -2.15
VSX2P58304 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
VSX2P58304 snoU109.1-201ENST00000459339 135 ntBASIC1.61□□□□□ -2.15
VSX2P58304 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.61□□□□□ -2.15
VSX2P58304 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
VSX2P58304 HMGB1P35-201ENST00000503360 598 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AC116562.3-201ENST00000506136 177 ntBASIC1.61□□□□□ -2.15
VSX2P58304 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.61□□□□□ -2.15
VSX2P58304 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.61□□□□□ -2.15
VSX2P58304 AC109329.1-201ENST00000518744 317 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.61□□□□□ -2.15
VSX2P58304 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.61□□□□□ -2.15
VSX2P58304 AP003392.2-201ENST00000527269 208 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VSX2P58304 AC068587.5-201ENST00000528506 175 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AP002453.2-201ENST00000533503 320 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.61□□□□□ -2.15
VSX2P58304 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
VSX2P58304 BNIP3P8-201ENST00000597863 560 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.61□□□□□ -2.15
VSX2P58304 AL360219.1-201ENST00000610230 366 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AC108479.2-201ENST00000617314 601 ntBASIC1.61□□□□□ -2.15
VSX2P58304 AC009487.4-201ENST00000624969 3585 ntBASIC1.61□□□□□ -2.15
VSX2P58304 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VSX2P58304 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 RNU4-21P-201ENST00000362802 126 ntBASIC1.6□□□□□ -2.15
VSX2P58304 SNORD115-3-201ENST00000363100 82 ntBASIC1.6□□□□□ -2.15
VSX2P58304 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
VSX2P58304 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VSX2P58304 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VSX2P58304 MIR1262-201ENST00000408276 93 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 MTND5P25-201ENST00000430499 799 ntBASIC1.6□□□□□ -2.15
VSX2P58304 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.6□□□□□ -2.15
VSX2P58304 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.6□□□□□ -2.15
VSX2P58304 AC009961.2-201ENST00000435771 251 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AL445567.1-201ENST00000439121 144 ntBASIC1.6□□□□□ -2.15
VSX2P58304 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.6□□□□□ -2.15
VSX2P58304 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.6□□□□□ -2.15
VSX2P58304 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 AC104806.1-201ENST00000508720 308 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 AP005639.2-201ENST00000527592 928 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.6□□□□□ -2.15
VSX2P58304 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.6□□□□□ -2.15
VSX2P58304 AC012414.6-201ENST00000568241 401 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AC004908.3-201ENST00000610248 625 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AL359314.1-201ENST00000616913 261 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AL132822.1-201ENST00000617063 513 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AC008121.3-201ENST00000618726 433 ntBASIC1.6□□□□□ -2.15
VSX2P58304 AC011155.2-201ENST00000623202 216 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms