Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH13P55290 BNIP3P16-201ENST00000589779 534 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AC010525.2-201ENST00000590920 195 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AC073410.2-201ENST00000603240 332 ntBASIC2.49□□□□□ -2.01
CDH13P55290 RNU6-85P-201ENST00000605989 107 ntBASIC2.49□□□□□ -2.01
CDH13P55290 uc_338.15-201ENST00000615470 191 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AC007792.1-201ENST00000623023 402 ntBASIC2.49□□□□□ -2.01
CDH13P55290 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH13P55290 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CDH13P55290 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CDH13P55290 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDH13P55290 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CDH13P55290 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CDH13P55290 SNORD62.1-201ENST00000362541 86 ntBASIC2.48□□□□□ -2.01
CDH13P55290 RNU6-529P-201ENST00000363383 104 ntBASIC2.48□□□□□ -2.01
CDH13P55290 RNU6-1245P-201ENST00000411130 106 ntBASIC2.48□□□□□ -2.01
CDH13P55290 RNU6-373P-201ENST00000411247 98 ntBASIC2.48□□□□□ -2.01
CDH13P55290 CYCSP48-201ENST00000417124 323 ntBASIC2.48□□□□□ -2.01
CDH13P55290 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH13P55290 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH13P55290 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH13P55290 CR769767.1-201ENST00000436337 346 ntBASIC2.48□□□□□ -2.01
CDH13P55290 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH13P55290 AC105272.1-201ENST00000438604 198 ntBASIC2.48□□□□□ -2.01
CDH13P55290 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH13P55290 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH13P55290 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
CDH13P55290 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH13P55290 AC243972.3-201ENST00000539655 198 ntBASIC2.48□□□□□ -2.01
CDH13P55290 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH13P55290 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH13P55290 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
CDH13P55290 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
CDH13P55290 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH13P55290 AL160281.1-201ENST00000605307 311 ntBASIC2.48□□□□□ -2.01
CDH13P55290 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH13P55290 Y_RNA.89-201ENST00000363031 102 ntBASIC2.47□□□□□ -2.01
CDH13P55290 Y_RNA.256-201ENST00000364594 104 ntBASIC2.47□□□□□ -2.01
CDH13P55290 MIR186-201ENST00000384988 86 ntBASIC2.47□□□□□ -2.01
CDH13P55290 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDH13P55290 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
CDH13P55290 RNU4-26P-201ENST00000410270 107 ntBASIC2.47□□□□□ -2.01
CDH13P55290 EIF1P1-201ENST00000421436 341 ntBASIC2.47□□□□□ -2.01
CDH13P55290 AC003685.2-201ENST00000422795 395 ntBASIC2.47□□□□□ -2.01
CDH13P55290 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
CDH13P55290 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH13P55290 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH13P55290 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH13P55290 AC011352.1-201ENST00000512300 793 ntBASIC2.47□□□□□ -2.01
CDH13P55290 SNORA25.11-201ENST00000515935 105 ntBASIC2.47□□□□□ -2.01
CDH13P55290 SNORA19.2-201ENST00000516013 114 ntBASIC2.47□□□□□ -2.01
CDH13P55290 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH13P55290 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.47□□□□□ -2.01
CDH13P55290 AC009314.1-201ENST00000603871 304 ntBASIC2.47□□□□□ -2.01
CDH13P55290 MIR3688-2-201ENST00000636963 87 ntBASIC2.47□□□□□ -2.01
CDH13P55290 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH13P55290 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
CDH13P55290 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH13P55290 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.01
CDH13P55290 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CDH13P55290 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH13P55290 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CDH13P55290 RNU1-72P-201ENST00000362976 153 ntBASIC2.46□□□□□ -2.02
CDH13P55290 RNU6-336P-201ENST00000364891 107 ntBASIC2.46□□□□□ -2.02
CDH13P55290 RNU6-877P-201ENST00000383868 107 ntBASIC2.46□□□□□ -2.02
CDH13P55290 RNU1-138P-201ENST00000384093 164 ntBASIC2.46□□□□□ -2.02
CDH13P55290 RNU6-1222P-201ENST00000384615 107 ntBASIC2.46□□□□□ -2.02
CDH13P55290 RNA5SP118-201ENST00000410385 109 ntBASIC2.46□□□□□ -2.02
CDH13P55290 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH13P55290 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH13P55290 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH13P55290 C8orf59P1-201ENST00000429930 303 ntBASIC2.46□□□□□ -2.02
CDH13P55290 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH13P55290 MTND1P4-201ENST00000435196 415 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH13P55290 MTCO2P3-201ENST00000442543 421 ntBASIC2.46□□□□□ -2.02
CDH13P55290 HMGN2P26-201ENST00000463169 339 ntBASIC2.46□□□□□ -2.02
CDH13P55290 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH13P55290 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.46□□□□□ -2.02
CDH13P55290 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH13P55290 MIR5692C1-201ENST00000585309 91 ntBASIC2.46□□□□□ -2.02
CDH13P55290 BNIP3P25-201ENST00000596023 559 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AP003465.2-201ENST00000602571 373 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AC084782.3-201ENST00000612282 578 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AL159153.1-201ENST00000619688 317 ntBASIC2.46□□□□□ -2.02
CDH13P55290 MIR5739-201ENST00000619803 80 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AC024614.3-201ENST00000637860 256 ntBASIC2.46□□□□□ -2.02
CDH13P55290 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH13P55290 ZNF271P-202ENST00000465539 1970 ntBASIC2.46□□□□□ -2.02
CDH13P55290 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH13P55290 AC027514.1-201ENST00000588561 1603 ntBASIC2.46□□□□□ -2.02
CDH13P55290 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH13P55290 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH13P55290 RNU6-525P-201ENST00000363685 104 ntBASIC2.45□□□□□ -2.02
CDH13P55290 RNU6-534P-201ENST00000364877 106 ntBASIC2.45□□□□□ -2.02
CDH13P55290 RNU6-827P-201ENST00000365553 106 ntBASIC2.45□□□□□ -2.02
CDH13P55290 Y_RNA.453-201ENST00000384223 109 ntBASIC2.45□□□□□ -2.02
CDH13P55290 RNU6-1106P-201ENST00000390845 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms