Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL022238.1-201ENST00000442557 355 ntBASIC0.89□□□□□ -2.27
RPL28P46779 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPL28P46779 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.89□□□□□ -2.27
RPL28P46779 DUXAP8-207ENST00000456786 622 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RNU1-131P-201ENST00000458943 161 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC130509.1-201ENST00000464158 433 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RPL31P58-201ENST00000469001 379 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RPS26P55-201ENST00000471178 356 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL28P46779 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL28P46779 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC015720.1-201ENST00000565251 277 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC069431.2-201ENST00000604149 1099 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC025811.1-201ENST00000604312 472 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC013244.3-201ENST00000605614 388 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AP000654.2-201ENST00000605633 586 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.89□□□□□ -2.27
RPL28P46779 RMST_7.1-201ENST00000621935 268 ntBASIC0.89□□□□□ -2.27
RPL28P46779 OR4G3P-201ENST00000633500 913 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC068205.3-201ENST00000636385 468 ntBASIC0.89□□□□□ -2.27
RPL28P46779 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPL28P46779 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPL28P46779 AC233981.2-201ENST00000611524 1614 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.89□□□□□ -2.27
RPL28P46779 MTND5P9-201ENST00000503854 1755 ntBASIC0.88□□□□□ -2.27
RPL28P46779 ZNF209P-201ENST00000593450 2304 ntBASIC0.88□□□□□ -2.27
RPL28P46779 MTND4P16-201ENST00000466108 1367 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AP000560.1-201ENST00000624150 1937 ntBASIC0.88□□□□□ -2.27
RPL28P46779 Y_RNA.332-201ENST00000365271 113 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AL357139.1-201ENST00000407792 426 ntBASIC0.88□□□□□ -2.27
RPL28P46779 CYCSP49-201ENST00000420810 319 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.88□□□□□ -2.27
RPL28P46779 HMGB1P31-201ENST00000437242 427 ntBASIC0.88□□□□□ -2.27
RPL28P46779 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.88□□□□□ -2.27
RPL28P46779 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.88□□□□□ -2.27
RPL28P46779 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.88□□□□□ -2.27
RPL28P46779 snoU13.23-201ENST00000458863 104 ntBASIC0.88□□□□□ -2.27
RPL28P46779 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.88□□□□□ -2.27
RPL28P46779 AC132942.1-201ENST00000486753 483 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.88□□□□□ -2.27
RPL28P46779 MTND2P33-201ENST00000506452 1031 ntBASIC0.88□□□□□ -2.27
RPL28P46779 MTCO3P9-201ENST00000506989 781 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.88□□□□□ -2.27
RPL28P46779 AC105185.1-201ENST00000518705 535 ntBASIC0.88□□□□□ -2.27
RPL28P46779 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.88□□□□□ -2.27
RPL28P46779 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.88□□□□□ -2.27
RPL28P46779 AC068338.1-201ENST00000565567 176 ntBASIC0.88□□□□□ -2.27
RPL28P46779 MIR3118-1-201ENST00000581787 76 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.88□□□□□ -2.27
RPL28P46779 DEFB131E-202ENST00000602581 683 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AP002360.4-201ENST00000606980 481 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AL512598.1-201ENST00000610158 273 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC097478.2-201ENST00000610572 514 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC092106.3-201ENST00000611308 722 ntBASIC0.88□□□□□ -2.27
RPL28P46779 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.88□□□□□ -2.27
RPL28P46779 AP002782.1-201ENST00000623107 614 ntBASIC0.88□□□□□ -2.27
RPL28P46779 AC241585.2-209ENST00000638217 143 ntBASIC0.88□□□□□ -2.27
RPL28P46779 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.88□□□□□ -2.27
RPL28P46779 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
RPL28P46779 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
RPL28P46779 RNU6-414P-201ENST00000363705 104 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RNU4-68P-201ENST00000364314 141 ntBASIC0.87□□□□□ -2.27
RPL28P46779 SNORD32B-201ENST00000364460 84 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RNU6-203P-201ENST00000384038 104 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RNU6-1179P-201ENST00000384667 107 ntBASIC0.87□□□□□ -2.27
RPL28P46779 MIR578-201ENST00000384828 96 ntBASIC0.87□□□□□ -2.27
RPL28P46779 SNORA40.4-201ENST00000390971 128 ntBASIC0.87□□□□□ -2.27
RPL28P46779 MIR1323-201ENST00000408090 73 ntBASIC0.87□□□□□ -2.27
RPL28P46779 MIR1267-201ENST00000408723 78 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RNU6-757P-201ENST00000410334 100 ntBASIC0.87□□□□□ -2.27
RPL28P46779 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL28P46779 AC139712.2-201ENST00000424302 339 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RPS27P16-201ENST00000425758 201 ntBASIC0.87□□□□□ -2.27
RPL28P46779 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.87□□□□□ -2.27
RPL28P46779 KATNBL1P3-201ENST00000443475 909 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RPL39P29-201ENST00000447779 157 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AL122001.1-201ENST00000457027 370 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RPL26P26-201ENST00000480251 434 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL28P46779 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL28P46779 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL28P46779 RNU7-51P-201ENST00000516560 62 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL28P46779 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.87□□□□□ -2.27
RPL28P46779 AC012414.6-201ENST00000568241 401 ntBASIC0.87□□□□□ -2.27
RPL28P46779 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.87□□□□□ -2.27
RPL28P46779 AC121334.2-201ENST00000605387 271 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AC025754.2-201ENST00000606491 432 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AL050343.2-201ENST00000607338 280 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AP000484.1-201ENST00000620067 1252 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AL121890.5-201ENST00000620848 304 ntBASIC0.87□□□□□ -2.27
RPL28P46779 AC004808.1-201ENST00000627671 721 ntBASIC0.87□□□□□ -2.27
RPL28P46779 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.87□□□□□ -2.27
RPL28P46779 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RPL28P46779 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.87□□□□□ -2.27
RPL28P46779 AC073343.1-201ENST00000328239 651 ntBASIC0.86□□□□□ -2.27
RPL28P46779 SNORD1A-201ENST00000364968 72 ntBASIC0.86□□□□□ -2.27
RPL28P46779 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms