Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC109329.2-201ENST00000519658 482 ntBASIC2.9□□□□□ -1.95
KRT9P35527 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.9□□□□□ -1.95
KRT9P35527 MIR5571-201ENST00000577998 113 ntBASIC2.9□□□□□ -1.95
KRT9P35527 FGF7P1-201ENST00000582820 288 ntBASIC2.9□□□□□ -1.95
KRT9P35527 MIR4635-201ENST00000583759 79 ntBASIC2.9□□□□□ -1.95
KRT9P35527 RNU6-6P-201ENST00000606623 107 ntBASIC2.9□□□□□ -1.95
KRT9P35527 U2.17-201ENST00000611454 95 ntBASIC2.9□□□□□ -1.95
KRT9P35527 AC009033.1-201ENST00000624279 431 ntBASIC2.9□□□□□ -1.95
KRT9P35527 CASC19-280ENST00000642102 1351 ntBASIC2.89□□□□□ -1.95
KRT9P35527 OR56A5-201ENST00000340110 738 ntBASIC2.89□□□□□ -1.95
KRT9P35527 RNU6-266P-201ENST00000364225 107 ntBASIC2.89□□□□□ -1.95
KRT9P35527 RNU6-622P-201ENST00000384272 103 ntBASIC2.89□□□□□ -1.95
KRT9P35527 MT-TL1-201ENST00000386347 75 ntBASIC2.89□□□□□ -1.95
KRT9P35527 RNU6-780P-201ENST00000391030 104 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AC074117.2-201ENST00000417130 397 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AC138623.1-201ENST00000418060 216 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT9P35527 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.89□□□□□ -1.95
KRT9P35527 AC069439.1-201ENST00000494739 167 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.89□□□□□ -1.95
KRT9P35527 AC079140.5-201ENST00000507882 310 ntBASIC2.89□□□□□ -1.95
KRT9P35527 MTCYBP40-201ENST00000509390 1135 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.89□□□□□ -1.95
KRT9P35527 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT9P35527 RNU6-507P-201ENST00000516045 100 ntBASIC2.89□□□□□ -1.95
KRT9P35527 SNORA20.3-201ENST00000516880 132 ntBASIC2.89□□□□□ -1.95
KRT9P35527 RNU6-835P-201ENST00000516974 104 ntBASIC2.89□□□□□ -1.95
KRT9P35527 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRT9P35527 AC023050.3-201ENST00000541142 333 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AL512360.1-201ENST00000555346 234 ntBASIC2.89□□□□□ -1.95
KRT9P35527 HMGB1P33-201ENST00000563485 527 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT9P35527 AL356575.1-201ENST00000603008 283 ntBASIC2.89□□□□□ -1.95
KRT9P35527 AC123912.5-201ENST00000605470 343 ntBASIC2.89□□□□□ -1.95
KRT9P35527 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.89□□□□□ -1.95
KRT9P35527 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.88□□□□□ -1.95
KRT9P35527 SNORD56.1-201ENST00000362913 68 ntBASIC2.88□□□□□ -1.95
KRT9P35527 SNORA25.6-201ENST00000364121 118 ntBASIC2.88□□□□□ -1.95
KRT9P35527 RNU1-112P-201ENST00000364401 164 ntBASIC2.88□□□□□ -1.95
KRT9P35527 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
KRT9P35527 RNU2-41P-201ENST00000410991 178 ntBASIC2.88□□□□□ -1.95
KRT9P35527 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.88□□□□□ -1.95
KRT9P35527 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KRT9P35527 MTND4LP16-201ENST00000440828 295 ntBASIC2.88□□□□□ -1.95
KRT9P35527 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.88□□□□□ -1.95
KRT9P35527 DYNLL1P5-201ENST00000467158 270 ntBASIC2.88□□□□□ -1.95
KRT9P35527 RPL23AP45-201ENST00000476406 468 ntBASIC2.88□□□□□ -1.95
KRT9P35527 RNA5SP401-201ENST00000515920 127 ntBASIC2.88□□□□□ -1.95
KRT9P35527 AC109635.3-201ENST00000529536 185 ntBASIC2.88□□□□□ -1.95
KRT9P35527 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.88□□□□□ -1.95
KRT9P35527 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.88□□□□□ -1.95
KRT9P35527 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.88□□□□□ -1.95
KRT9P35527 AC090897.2-201ENST00000581715 130 ntBASIC2.88□□□□□ -1.95
KRT9P35527 MIR3941-201ENST00000582572 103 ntBASIC2.88□□□□□ -1.95
KRT9P35527 Z82243.1-201ENST00000609432 473 ntBASIC2.88□□□□□ -1.95
KRT9P35527 AC135507.2-201ENST00000612443 309 ntBASIC2.88□□□□□ -1.95
KRT9P35527 HMGB1P24-202ENST00000615653 685 ntBASIC2.88□□□□□ -1.95
KRT9P35527 AL449363.1-201ENST00000617815 186 ntBASIC2.88□□□□□ -1.95
KRT9P35527 U4.7-201ENST00000638126 106 ntBASIC2.88□□□□□ -1.95
KRT9P35527 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
KRT9P35527 RNU6-1010P-201ENST00000362757 107 ntBASIC2.87□□□□□ -1.95
KRT9P35527 Y_RNA.61-201ENST00000362835 102 ntBASIC2.87□□□□□ -1.95
KRT9P35527 RNU1-72P-201ENST00000362976 153 ntBASIC2.87□□□□□ -1.95
KRT9P35527 Y_RNA.295-201ENST00000364918 102 ntBASIC2.87□□□□□ -1.95
KRT9P35527 RNU6-877P-201ENST00000383868 107 ntBASIC2.87□□□□□ -1.95
KRT9P35527 RNU6-1009P-201ENST00000390996 107 ntBASIC2.87□□□□□ -1.95
KRT9P35527 RNA5SP21-201ENST00000410917 96 ntBASIC2.87□□□□□ -1.95
KRT9P35527 USP9YP27-201ENST00000418455 438 ntBASIC2.87□□□□□ -1.95
KRT9P35527 EIF4EP4-201ENST00000424916 578 ntBASIC2.87□□□□□ -1.95
KRT9P35527 MTCO1P20-201ENST00000425366 358 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AC236972.1-201ENST00000433225 199 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT9P35527 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT9P35527 MTND1P11-201ENST00000456661 876 ntBASIC2.87□□□□□ -1.95
KRT9P35527 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AIG1P1-201ENST00000503376 148 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AC025465.4-201ENST00000513422 638 ntBASIC2.87□□□□□ -1.95
KRT9P35527 RNU4-29P-201ENST00000515943 174 ntBASIC2.87□□□□□ -1.95
KRT9P35527 RNU6-358P-201ENST00000516564 75 ntBASIC2.87□□□□□ -1.95
KRT9P35527 MTND1P35-201ENST00000526739 508 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AL512310.1-201ENST00000548639 172 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AC090115.3-201ENST00000553218 849 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT9P35527 AL157687.1-201ENST00000554853 619 ntBASIC2.87□□□□□ -1.95
KRT9P35527 EIF4BP1-201ENST00000554881 351 ntBASIC2.87□□□□□ -1.95
KRT9P35527 AC009994.1-201ENST00000606889 253 ntBASIC2.87□□□□□ -1.95
KRT9P35527 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRT9P35527 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.87□□□□□ -1.95
KRT9P35527 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRT9P35527 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.86□□□□□ -1.95
KRT9P35527 CBX3P1-201ENST00000325243 554 ntBASIC2.86□□□□□ -1.95
KRT9P35527 Y_RNA.38-201ENST00000362617 102 ntBASIC2.86□□□□□ -1.95
KRT9P35527 Y_RNA.89-201ENST00000363031 102 ntBASIC2.86□□□□□ -1.95
KRT9P35527 RNU6-1090P-201ENST00000364065 94 ntBASIC2.86□□□□□ -1.95
KRT9P35527 RNA5SP125-201ENST00000364843 120 ntBASIC2.86□□□□□ -1.95
KRT9P35527 Y_RNA.500-201ENST00000384466 111 ntBASIC2.86□□□□□ -1.95
KRT9P35527 RNU1-57P-201ENST00000384491 166 ntBASIC2.86□□□□□ -1.95
KRT9P35527 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRT9P35527 SNORD56-201ENST00000413522 71 ntBASIC2.86□□□□□ -1.95
KRT9P35527 AL096701.2-201ENST00000416920 238 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms