Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.57□□□□□ -1.68
RXRBP28702 MIR4458-201ENST00000578872 75 ntBASIC4.57□□□□□ -1.68
RXRBP28702 AC009314.1-201ENST00000603871 304 ntBASIC4.57□□□□□ -1.68
RXRBP28702 MZT1P2-201ENST00000604387 248 ntBASIC4.57□□□□□ -1.68
RXRBP28702 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
RXRBP28702 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RXRBP28702 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
RXRBP28702 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RXRBP28702 AL356274.2-201ENST00000624379 3752 ntBASIC4.56□□□□□ -1.68
RXRBP28702 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RXRBP28702 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RXRBP28702 RNA5SP197-201ENST00000363357 119 ntBASIC4.56□□□□□ -1.68
RXRBP28702 RNY1P5-201ENST00000383890 115 ntBASIC4.56□□□□□ -1.68
RXRBP28702 MIR521-1-201ENST00000384902 87 ntBASIC4.56□□□□□ -1.68
RXRBP28702 MIR513A2-201ENST00000385249 127 ntBASIC4.56□□□□□ -1.68
RXRBP28702 MIR887-201ENST00000401258 79 ntBASIC4.56□□□□□ -1.68
RXRBP28702 TMEM167AP1-201ENST00000423409 219 ntBASIC4.56□□□□□ -1.68
RXRBP28702 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.56□□□□□ -1.68
RXRBP28702 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.56□□□□□ -1.68
RXRBP28702 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.56□□□□□ -1.68
RXRBP28702 APOOP4-201ENST00000513530 597 ntBASIC4.56□□□□□ -1.68
RXRBP28702 MIR892C-201ENST00000516410 77 ntBASIC4.56□□□□□ -1.68
RXRBP28702 AC093023.1-201ENST00000547375 507 ntBASIC4.56□□□□□ -1.68
RXRBP28702 AC090877.1-201ENST00000561418 344 ntBASIC4.56□□□□□ -1.68
RXRBP28702 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.56□□□□□ -1.68
RXRBP28702 MIR8076-201ENST00000611401 83 ntBASIC4.56□□□□□ -1.68
RXRBP28702 Z99571.1-201ENST00000636677 394 ntBASIC4.56□□□□□ -1.68
RXRBP28702 AP001148.1-201ENST00000624124 2359 ntBASIC4.56□□□□□ -1.68
RXRBP28702 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
RXRBP28702 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RXRBP28702 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.56□□□□□ -1.68
RXRBP28702 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RXRBP28702 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RXRBP28702 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RXRBP28702 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RXRBP28702 RNU6-704P-201ENST00000364162 103 ntBASIC4.55□□□□□ -1.68
RXRBP28702 Y_RNA.358-201ENST00000365491 99 ntBASIC4.55□□□□□ -1.68
RXRBP28702 RNU6-76P-201ENST00000384060 104 ntBASIC4.55□□□□□ -1.68
RXRBP28702 RNY3P4-201ENST00000384428 101 ntBASIC4.55□□□□□ -1.68
RXRBP28702 RNU2-20P-201ENST00000410425 191 ntBASIC4.55□□□□□ -1.68
RXRBP28702 SNORD56-201ENST00000413522 71 ntBASIC4.55□□□□□ -1.68
RXRBP28702 AL592045.1-201ENST00000429867 352 ntBASIC4.55□□□□□ -1.68
RXRBP28702 HLA-N-201ENST00000437516 135 ntBASIC4.55□□□□□ -1.68
RXRBP28702 U8.22-201ENST00000459141 133 ntBASIC4.55□□□□□ -1.68
RXRBP28702 RPS29P26-201ENST00000477483 171 ntBASIC4.55□□□□□ -1.68
RXRBP28702 AC091826.1-201ENST00000514065 313 ntBASIC4.55□□□□□ -1.68
RXRBP28702 RNU6-346P-201ENST00000516288 111 ntBASIC4.55□□□□□ -1.68
RXRBP28702 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.55□□□□□ -1.68
RXRBP28702 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.55□□□□□ -1.68
RXRBP28702 AC034102.8-201ENST00000615146 484 ntBASIC4.55□□□□□ -1.68
RXRBP28702 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RXRBP28702 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
RXRBP28702 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RXRBP28702 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RXRBP28702 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.54□□□□□ -1.68
RXRBP28702 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-37P-201ENST00000362692 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU1-18P-201ENST00000363062 164 ntBASIC4.54□□□□□ -1.68
RXRBP28702 U3.6-201ENST00000363622 211 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-11P-201ENST00000364234 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-47P-201ENST00000383866 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-25P-201ENST00000383873 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-1-201ENST00000383898 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-36P-201ENST00000384172 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-4P-201ENST00000384205 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-5P-201ENST00000384238 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 SNORA36C-201ENST00000384289 132 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-3P-201ENST00000384314 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-16P-201ENST00000384385 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-15P-201ENST00000384534 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-2-201ENST00000384627 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-29P-201ENST00000384637 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-9-201ENST00000384776 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 MIR190B-201ENST00000401119 79 ntBASIC4.54□□□□□ -1.68
RXRBP28702 AL079342.1-201ENST00000401460 267 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-712P-201ENST00000410558 100 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU4-78P-201ENST00000410940 126 ntBASIC4.54□□□□□ -1.68
RXRBP28702 AL592148.1-201ENST00000413568 445 ntBASIC4.54□□□□□ -1.68
RXRBP28702 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RXRBP28702 RPL26P6-201ENST00000440913 438 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RN7SL585P-201ENST00000470538 280 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-496P-201ENST00000516145 99 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNA5SP471-201ENST00000516971 106 ntBASIC4.54□□□□□ -1.68
RXRBP28702 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.54□□□□□ -1.68
RXRBP28702 AC022559.1-201ENST00000520905 205 ntBASIC4.54□□□□□ -1.68
RXRBP28702 AC025755.1-201ENST00000521306 278 ntBASIC4.54□□□□□ -1.68
RXRBP28702 MRPS36P4-201ENST00000534436 298 ntBASIC4.54□□□□□ -1.68
RXRBP28702 MIR4425-201ENST00000580572 84 ntBASIC4.54□□□□□ -1.68
RXRBP28702 RNU6-6P-201ENST00000606623 107 ntBASIC4.54□□□□□ -1.68
RXRBP28702 AL590240.4-201ENST00000616908 390 ntBASIC4.54□□□□□ -1.68
RXRBP28702 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
RXRBP28702 AC090740.1-201ENST00000623193 2262 ntBASIC4.54□□□□□ -1.68
RXRBP28702 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RXRBP28702 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RXRBP28702 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RXRBP28702 Y_RNA.238-201ENST00000364441 102 ntBASIC4.53□□□□□ -1.68
RXRBP28702 U3.13-201ENST00000364804 214 ntBASIC4.53□□□□□ -1.68
RXRBP28702 MIR613-201ENST00000385248 95 ntBASIC4.53□□□□□ -1.68
RXRBP28702 SNORA12.2-201ENST00000391040 156 ntBASIC4.53□□□□□ -1.68
RXRBP28702 Y_RNA.626-201ENST00000411288 95 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms