Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR3529-201ENST00000637713 78 ntBASIC-0.61□□□□□ -2.51
VCANP13611 AL390237.1-201ENST00000404226 1415 ntBASIC-0.62□□□□□ -2.51
VCANP13611 SUGT1P1-201ENST00000379514 476 ntBASIC-0.62□□□□□ -2.51
VCANP13611 MIR200A-201ENST00000384875 90 ntBASIC-0.62□□□□□ -2.51
VCANP13611 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.62□□□□□ -2.51
VCANP13611 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.62□□□□□ -2.51
VCANP13611 MIR3666-201ENST00000607845 111 ntBASIC-0.62□□□□□ -2.51
VCANP13611 MTND5P17-201ENST00000418405 1603 ntBASIC-0.62□□□□□ -2.51
VCANP13611 RNU6-756P-201ENST00000383997 107 ntBASIC-0.62□□□□□ -2.51
VCANP13611 SNORA40.19-201ENST00000390846 128 ntBASIC-0.62□□□□□ -2.51
VCANP13611 AC244098.2-201ENST00000422068 99 ntBASIC-0.62□□□□□ -2.51
VCANP13611 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.62□□□□□ -2.51
VCANP13611 Z82190.1-201ENST00000454534 490 ntBASIC-0.62□□□□□ -2.51
VCANP13611 AC023632.1-201ENST00000518463 375 ntBASIC-0.62□□□□□ -2.51
VCANP13611 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.62□□□□□ -2.51
VCANP13611 AC012065.4-201ENST00000602445 679 ntBASIC-0.62□□□□□ -2.51
VCANP13611 MIR153-1-201ENST00000384914 90 ntBASIC-0.62□□□□□ -2.51
VCANP13611 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.62□□□□□ -2.51
VCANP13611 MTCO2P20-201ENST00000437339 673 ntBASIC-0.62□□□□□ -2.51
VCANP13611 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.62□□□□□ -2.51
VCANP13611 AC060771.1-201ENST00000582031 164 ntBASIC-0.62□□□□□ -2.51
VCANP13611 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.63□□□□□ -2.51
VCANP13611 RNA5SP216-201ENST00000516111 123 ntBASIC-0.63□□□□□ -2.51
VCANP13611 AL133241.1-201ENST00000556832 487 ntBASIC-0.63□□□□□ -2.51
VCANP13611 FTX_3.1-201ENST00000610451 147 ntBASIC-0.63□□□□□ -2.51
VCANP13611 MIR95-201ENST00000385072 81 ntBASIC-0.63□□□□□ -2.51
VCANP13611 MIR610-201ENST00000385139 96 ntBASIC-0.63□□□□□ -2.51
VCANP13611 RPF2P2-201ENST00000504693 896 ntBASIC-0.63□□□□□ -2.51
VCANP13611 NAMPTP3-201ENST00000569273 224 ntBASIC-0.63□□□□□ -2.51
VCANP13611 MIR3126-201ENST00000577443 74 ntBASIC-0.63□□□□□ -2.51
VCANP13611 SNORD33-201ENST00000362761 85 ntBASIC-0.63□□□□□ -2.51
VCANP13611 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.63□□□□□ -2.51
VCANP13611 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.63□□□□□ -2.51
VCANP13611 RNU2-36P-201ENST00000410361 191 ntBASIC-0.63□□□□□ -2.51
VCANP13611 RPL21P66-201ENST00000426566 466 ntBASIC-0.63□□□□□ -2.51
VCANP13611 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.63□□□□□ -2.51
VCANP13611 NCOR1P1-202ENST00000486162 291 ntBASIC-0.63□□□□□ -2.51
VCANP13611 CYCSP27-201ENST00000527643 293 ntBASIC-0.63□□□□□ -2.51
VCANP13611 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.63□□□□□ -2.51
VCANP13611 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
VCANP13611 AC093303.1-201ENST00000514549 295 ntBASIC-0.64□□□□□ -2.51
VCANP13611 RNU6-732P-201ENST00000516033 103 ntBASIC-0.64□□□□□ -2.51
VCANP13611 AC025588.4-201ENST00000615802 908 ntBASIC-0.64□□□□□ -2.51
VCANP13611 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.64□□□□□ -2.51
VCANP13611 MRPS36P2-201ENST00000512569 299 ntBASIC-0.64□□□□□ -2.51
VCANP13611 SNORA31.22-201ENST00000517204 135 ntBASIC-0.64□□□□□ -2.51
VCANP13611 OR6C73P-201ENST00000546432 358 ntBASIC-0.64□□□□□ -2.51
VCANP13611 SNORA36.2-201ENST00000384004 127 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AL953862.1-201ENST00000423016 168 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
VCANP13611 MED13P1-201ENST00000428342 171 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.65□□□□□ -2.51
VCANP13611 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC069113.3-201ENST00000521019 150 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC005261.5-201ENST00000596280 355 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC091965.5-201ENST00000624785 342 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC016716.1-201ENST00000265882 708 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.65□□□□□ -2.51
VCANP13611 MTND1P20-201ENST00000430341 950 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.65□□□□□ -2.51
VCANP13611 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC-0.65□□□□□ -2.51
VCANP13611 AC132479.1-201ENST00000449160 144 ntBASIC-0.65□□□□□ -2.51
VCANP13611 RNA5SP168-201ENST00000516642 112 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC067904.2-201ENST00000517322 1283 ntBASIC-0.65□□□□□ -2.51
VCANP13611 SUMO2P16-201ENST00000519475 264 ntBASIC-0.65□□□□□ -2.51
VCANP13611 7SK.10-201ENST00000621414 298 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC116563.2-201ENST00000624751 535 ntBASIC-0.65□□□□□ -2.51
VCANP13611 MIR942-201ENST00000401111 86 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AL356320.2-201ENST00000417263 507 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.65□□□□□ -2.51
VCANP13611 RNU7-159P-201ENST00000459284 62 ntBASIC-0.65□□□□□ -2.51
VCANP13611 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.65□□□□□ -2.51
VCANP13611 MIR4432-201ENST00000581823 84 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC117490.2-201ENST00000610042 594 ntBASIC-0.65□□□□□ -2.51
VCANP13611 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.66□□□□□ -2.51
VCANP13611 HLA-S-202ENST00000425174 53 ntBASIC-0.66□□□□□ -2.51
VCANP13611 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.66□□□□□ -2.51
VCANP13611 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.66□□□□□ -2.51
VCANP13611 AC010683.1-201ENST00000473673 378 ntBASIC-0.66□□□□□ -2.51
VCANP13611 HAUS1P3-201ENST00000523909 662 ntBASIC-0.66□□□□□ -2.51
VCANP13611 ZNF705CP-201ENST00000530515 889 ntBASIC-0.66□□□□□ -2.51
VCANP13611 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.66□□□□□ -2.51
VCANP13611 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.66□□□□□ -2.51
VCANP13611 RNU6-220P-201ENST00000390919 107 ntBASIC-0.66□□□□□ -2.52
VCANP13611 USP9YP19-201ENST00000412165 485 ntBASIC-0.66□□□□□ -2.52
VCANP13611 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.66□□□□□ -2.52
VCANP13611 SUMO2P14-201ENST00000604488 293 ntBASIC-0.66□□□□□ -2.52
VCANP13611 AL133445.2-201ENST00000611191 527 ntBASIC-0.66□□□□□ -2.52
VCANP13611 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
VCANP13611 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.66□□□□□ -2.52
VCANP13611 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC-0.66□□□□□ -2.52
VCANP13611 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.66□□□□□ -2.52
VCANP13611 AC022616.8-201ENST00000533569 253 ntBASIC-0.66□□□□□ -2.52
VCANP13611 SNRPGP20-201ENST00000604477 205 ntBASIC-0.66□□□□□ -2.52
VCANP13611 AL161629.2-201ENST00000615347 275 ntBASIC-0.66□□□□□ -2.52
VCANP13611 AC040168.1-201ENST00000623594 991 ntBASIC-0.66□□□□□ -2.52
VCANP13611 AL355796.1-201ENST00000406706 323 ntBASIC-0.67□□□□□ -2.52
VCANP13611 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.67□□□□□ -2.52
VCANP13611 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.67□□□□□ -2.52
VCANP13611 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms