Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.69□□□□□ -2.52
TOP2AP11388 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.69□□□□□ -2.52
TOP2AP11388 AC021506.2-201ENST00000612354 169 ntBASIC-0.69□□□□□ -2.52
TOP2AP11388 uc_338.15-201ENST00000615470 191 ntBASIC-0.69□□□□□ -2.52
TOP2AP11388 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.69□□□□□ -2.52
TOP2AP11388 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
TOP2AP11388 AL355796.1-201ENST00000406706 323 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.7□□□□□ -2.52
TOP2AP11388 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.7□□□□□ -2.52
TOP2AP11388 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.7□□□□□ -2.52
TOP2AP11388 SNORD4A-201ENST00000459174 72 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 MIR5094-201ENST00000578766 85 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 AC092953.2-201ENST00000608000 699 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.7□□□□□ -2.52
TOP2AP11388 AC009032.1-201ENST00000617574 431 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 AC245060.5-201ENST00000610778 3293 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 AL390237.1-201ENST00000404226 1415 ntBASIC-0.7□□□□□ -2.52
TOP2AP11388 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
TOP2AP11388 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 MIR153-2-201ENST00000385225 87 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 RNU6-747P-201ENST00000390928 104 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 RNU6-360P-201ENST00000390944 104 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 RNU6-241P-201ENST00000391148 104 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.71□□□□□ -2.52
TOP2AP11388 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.71□□□□□ -2.52
TOP2AP11388 RPS3AP17-201ENST00000472594 777 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 AC124293.1-201ENST00000530034 493 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 ADAM3B-201ENST00000569937 840 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 AL357094.1-201ENST00000603845 844 ntBASIC-0.71□□□□□ -2.52
TOP2AP11388 MIR635-201ENST00000384830 98 ntBASIC-0.72□□□□□ -2.52
TOP2AP11388 SNORA16.2-201ENST00000390991 127 ntBASIC-0.72□□□□□ -2.52
TOP2AP11388 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.72□□□□□ -2.52
TOP2AP11388 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.72□□□□□ -2.52
TOP2AP11388 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.72□□□□□ -2.52
TOP2AP11388 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.72□□□□□ -2.52
TOP2AP11388 AC022523.2-201ENST00000561045 150 ntBASIC-0.72□□□□□ -2.52
TOP2AP11388 AC092447.9-201ENST00000603395 144 ntBASIC-0.72□□□□□ -2.52
TOP2AP11388 AC105148.1-201ENST00000604961 409 ntBASIC-0.72□□□□□ -2.52
TOP2AP11388 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.72□□□□□ -2.52
TOP2AP11388 SNORA1.1-201ENST00000364671 133 ntBASIC-0.73□□□□□ -2.53
TOP2AP11388 TAF9BP2-201ENST00000400856 499 ntBASIC-0.73□□□□□ -2.53
TOP2AP11388 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.73□□□□□ -2.53
TOP2AP11388 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.73□□□□□ -2.53
TOP2AP11388 SNORA31.4-201ENST00000516049 129 ntBASIC-0.73□□□□□ -2.53
TOP2AP11388 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.73□□□□□ -2.53
TOP2AP11388 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
TOP2AP11388 MTCO2P15-201ENST00000532655 656 ntBASIC-0.73□□□□□ -2.53
TOP2AP11388 AC005951.2-201ENST00000576282 495 ntBASIC-0.73□□□□□ -2.53
TOP2AP11388 AC064807.4-201ENST00000607201 407 ntBASIC-0.73□□□□□ -2.53
TOP2AP11388 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.74□□□□□ -2.53
TOP2AP11388 RNU6-863P-201ENST00000515989 104 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.74□□□□□ -2.53
TOP2AP11388 AC112187.2-201ENST00000604345 283 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 RN7SL660P-201ENST00000614852 299 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 FTX_2.1-201ENST00000618816 94 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AL359854.1-201ENST00000614203 1594 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 SNORD118-201ENST00000363593 134 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.74□□□□□ -2.53
TOP2AP11388 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.74□□□□□ -2.53
TOP2AP11388 AL353706.1-201ENST00000436728 494 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AL049714.1-201ENST00000466686 347 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 HMGB1P30-201ENST00000492455 606 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 COX7A2P2-201ENST00000505291 250 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.74□□□□□ -2.53
TOP2AP11388 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AC105185.1-201ENST00000518705 535 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AC015688.6-201ENST00000577737 104 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AC025627.3-201ENST00000582078 182 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AC004775.1-201ENST00000607389 753 ntBASIC-0.74□□□□□ -2.53
TOP2AP11388 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.74□□□□□ -2.53
TOP2AP11388 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
TOP2AP11388 RNU4-79P-201ENST00000362764 141 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 RNU6-950P-201ENST00000384651 107 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 RNA5SP222-201ENST00000411039 105 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.75□□□□□ -2.53
TOP2AP11388 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.75□□□□□ -2.53
TOP2AP11388 AC104164.3-201ENST00000467363 1258 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 AC010469.2-201ENST00000496412 480 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 AC025465.4-201ENST00000513422 638 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.75□□□□□ -2.53
TOP2AP11388 CYCSP27-201ENST00000527643 293 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 AL049870.4-201ENST00000555741 486 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 AP002906.1-201ENST00000603405 233 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.75□□□□□ -2.53
TOP2AP11388 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 SNORD14C-201ENST00000365382 88 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 BTF3P11-201ENST00000426582 477 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 MTND1P20-201ENST00000430341 950 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.76□□□□□ -2.53
TOP2AP11388 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 SNORD79.1-201ENST00000516069 84 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 RNA5SP67-201ENST00000516422 131 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 AL365434.2-201ENST00000607979 234 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 AC078938.1-201ENST00000620993 318 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms