Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC087884.1-201ENST00000469738 328 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.34□□□□□ -2.19
UPK1BO75841 AC116562.3-201ENST00000506136 177 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.34□□□□□ -2.19
UPK1BO75841 AC008834.1-201ENST00000511612 175 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNU2-46P-201ENST00000517038 113 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNU6-685P-201ENST00000517088 95 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AP005597.4-201ENST00000526762 229 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AC068587.5-201ENST00000528506 175 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.34□□□□□ -2.19
UPK1BO75841 AC009063.1-201ENST00000563342 702 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AC137800.2-201ENST00000574375 120 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AC009977.1-201ENST00000586015 570 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.34□□□□□ -2.19
UPK1BO75841 AC091304.9-201ENST00000612091 226 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RMST_4.1-201ENST00000616886 107 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AL590240.4-201ENST00000616908 390 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AC022960.3-201ENST00000619794 441 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
UPK1BO75841 MIR424-201ENST00000362227 98 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 SNORD114-6-201ENST00000364393 72 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 RNU4-28P-201ENST00000364739 141 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 RNU6-169P-201ENST00000365336 107 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 SNORA48.1-201ENST00000390879 135 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AL033519.2-201ENST00000403958 392 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 RNA5SP100-201ENST00000410903 110 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 RNA5SP59-201ENST00000410922 110 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.33□□□□□ -2.2
UPK1BO75841 AL590556.1-201ENST00000423231 483 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK1BO75841 CBX3P6-201ENST00000430257 527 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK1BO75841 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK1BO75841 MTND2P4-201ENST00000445034 1004 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 TAF9P1-201ENST00000445421 515 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 ART2BP-201ENST00000453501 499 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 TAF9P2-201ENST00000454958 515 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK1BO75841 AC104806.1-201ENST00000508720 308 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK1BO75841 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 COPS8P3-201ENST00000526024 482 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK1BO75841 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 MIR548AB-201ENST00000584917 84 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AC022022.2-201ENST00000602989 360 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AL133173.2-201ENST00000614270 90 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK1BO75841 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.33□□□□□ -2.2
UPK1BO75841 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPK1BO75841 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
UPK1BO75841 RNA5SP493-201ENST00000364115 91 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 SNORD115-7-201ENST00000365306 82 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UPK1BO75841 RNU6-607P-201ENST00000411283 108 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UPK1BO75841 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1BO75841 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.32□□□□□ -2.2
UPK1BO75841 SNRPGP7-201ENST00000469016 106 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 AC021146.2-201ENST00000504736 556 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 TPT1P8-201ENST00000510120 555 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 MIR3169-201ENST00000578032 83 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK1BO75841 AL022161.1-201ENST00000604390 213 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 AC099842.1-201ENST00000619919 596 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 AC130454.1-201ENST00000622948 401 ntBASIC1.32□□□□□ -2.2
UPK1BO75841 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UPK1BO75841 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK1BO75841 RNU4-15P-201ENST00000362613 141 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 RNU6-160P-201ENST00000384591 107 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 OR6C66P-201ENST00000414917 930 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 AL356320.1-201ENST00000429616 163 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 RPL32P28-201ENST00000443577 397 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.31□□□□□ -2.2
UPK1BO75841 AL035666.1-201ENST00000446195 348 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK1BO75841 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1BO75841 AP002770.2-201ENST00000543613 532 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1BO75841 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1BO75841 MIR3908-201ENST00000579798 126 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
UPK1BO75841 BNIP3P22-201ENST00000593399 556 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 AC010900.2-201ENST00000604508 210 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 AP000654.2-201ENST00000605633 586 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK1BO75841 AC120349.3-201ENST00000624377 529 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 Z69720.2-201ENST00000624755 279 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 U4.7-201ENST00000638126 106 ntBASIC1.31□□□□□ -2.2
UPK1BO75841 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UPK1BO75841 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
UPK1BO75841 CBX3P1-201ENST00000325243 554 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-37P-201ENST00000362692 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms