Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.88□□□□□ -1.95
TAF4O00268 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.88□□□□□ -1.95
TAF4O00268 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TAF4O00268 AC083906.5-201ENST00000503722 328 ntBASIC2.88□□□□□ -1.95
TAF4O00268 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.88□□□□□ -1.95
TAF4O00268 RNA5SP458-201ENST00000516188 119 ntBASIC2.88□□□□□ -1.95
TAF4O00268 SNORD19.2-201ENST00000516978 73 ntBASIC2.88□□□□□ -1.95
TAF4O00268 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.88□□□□□ -1.95
TAF4O00268 AC079600.2-201ENST00000550076 130 ntBASIC2.88□□□□□ -1.95
TAF4O00268 AC090115.3-201ENST00000553218 849 ntBASIC2.88□□□□□ -1.95
TAF4O00268 AL391813.1-201ENST00000603098 260 ntBASIC2.88□□□□□ -1.95
TAF4O00268 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
TAF4O00268 uc_338.25-201ENST00000613756 156 ntBASIC2.88□□□□□ -1.95
TAF4O00268 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.88□□□□□ -1.95
TAF4O00268 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
TAF4O00268 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.88□□□□□ -1.95
TAF4O00268 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TAF4O00268 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
TAF4O00268 ZNF658B-202ENST00000615961 3375 ntBASIC2.87□□□□□ -1.95
TAF4O00268 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TAF4O00268 Y_RNA.160-201ENST00000363677 92 ntBASIC2.87□□□□□ -1.95
TAF4O00268 SNORD113-7-201ENST00000363762 77 ntBASIC2.87□□□□□ -1.95
TAF4O00268 Z98749.2-208ENST00000381646 500 ntBASIC2.87□□□□□ -1.95
TAF4O00268 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TAF4O00268 RNU6-214P-201ENST00000384130 107 ntBASIC2.87□□□□□ -1.95
TAF4O00268 SNORD67-201ENST00000390833 111 ntBASIC2.87□□□□□ -1.95
TAF4O00268 MIR450B-201ENST00000401182 78 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AL356776.1-201ENST00000406574 447 ntBASIC2.87□□□□□ -1.95
TAF4O00268 RNU2-3P-201ENST00000410144 191 ntBASIC2.87□□□□□ -1.95
TAF4O00268 RNU2-25P-201ENST00000411041 191 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.87□□□□□ -1.95
TAF4O00268 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.87□□□□□ -1.95
TAF4O00268 AC124916.1-201ENST00000444020 547 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.87□□□□□ -1.95
TAF4O00268 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.87□□□□□ -1.95
TAF4O00268 SNORD109B-201ENST00000458961 67 ntBASIC2.87□□□□□ -1.95
TAF4O00268 SNORD109A-201ENST00000459128 67 ntBASIC2.87□□□□□ -1.95
TAF4O00268 HMGN2P26-201ENST00000463169 339 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.87□□□□□ -1.95
TAF4O00268 RNA5SP445-201ENST00000515889 115 ntBASIC2.87□□□□□ -1.95
TAF4O00268 RNU6-377P-201ENST00000515965 102 ntBASIC2.87□□□□□ -1.95
TAF4O00268 RNU6-273P-201ENST00000516937 96 ntBASIC2.87□□□□□ -1.95
TAF4O00268 RN7SKP272-201ENST00000516988 232 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AC087854.1-201ENST00000519706 414 ntBASIC2.87□□□□□ -1.95
TAF4O00268 IGKV3-31-201ENST00000523109 329 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.87□□□□□ -1.95
TAF4O00268 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.87□□□□□ -1.95
TAF4O00268 AC060780.3-201ENST00000589464 80 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AC005261.5-201ENST00000596280 355 ntBASIC2.87□□□□□ -1.95
TAF4O00268 AC090617.10-201ENST00000624308 134 ntBASIC2.87□□□□□ -1.95
TAF4O00268 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TAF4O00268 Y_RNA.118-201ENST00000363300 101 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RNA5SP99-201ENST00000364020 114 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RNU6-1013P-201ENST00000384180 107 ntBASIC2.86□□□□□ -1.95
TAF4O00268 Y_RNA.530-201ENST00000384587 101 ntBASIC2.86□□□□□ -1.95
TAF4O00268 MIR1287-201ENST00000408492 90 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RNU6-1245P-201ENST00000411130 106 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RN7SKP192-201ENST00000411291 327 ntBASIC2.86□□□□□ -1.95
TAF4O00268 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.86□□□□□ -1.95
TAF4O00268 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.86□□□□□ -1.95
TAF4O00268 MTND4LP16-201ENST00000440828 295 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RNU7-138P-201ENST00000459479 64 ntBASIC2.86□□□□□ -1.95
TAF4O00268 RPS29P21-201ENST00000496272 170 ntBASIC2.86□□□□□ -1.95
TAF4O00268 SCGB1D5P-201ENST00000515134 247 ntBASIC2.86□□□□□ -1.95
TAF4O00268 Y_RNA.665-201ENST00000516177 98 ntBASIC2.86□□□□□ -1.95
TAF4O00268 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.86□□□□□ -1.95
TAF4O00268 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.86□□□□□ -1.95
TAF4O00268 AC023050.3-201ENST00000541142 333 ntBASIC2.86□□□□□ -1.95
TAF4O00268 AC025423.5-201ENST00000550230 219 ntBASIC2.86□□□□□ -1.95
TAF4O00268 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.86□□□□□ -1.95
TAF4O00268 AC016727.1-205ENST00000605437 569 ntBASIC2.86□□□□□ -1.95
TAF4O00268 AC006504.8-201ENST00000621046 635 ntBASIC2.86□□□□□ -1.95
TAF4O00268 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TAF4O00268 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.86□□□□□ -1.95
TAF4O00268 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TAF4O00268 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.86□□□□□ -1.95
TAF4O00268 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TAF4O00268 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TAF4O00268 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.85□□□□□ -1.95
TAF4O00268 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
TAF4O00268 AC138393.1-203ENST00000327086 343 ntBASIC2.85□□□□□ -1.95
TAF4O00268 RNU1-100P-201ENST00000365255 165 ntBASIC2.85□□□□□ -1.95
TAF4O00268 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TAF4O00268 SNORD116-20-201ENST00000384529 92 ntBASIC2.85□□□□□ -1.95
TAF4O00268 SNORA67.4-201ENST00000384688 142 ntBASIC2.85□□□□□ -1.95
TAF4O00268 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
TAF4O00268 SNORA3.2-201ENST00000408221 125 ntBASIC2.85□□□□□ -1.95
TAF4O00268 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.85□□□□□ -1.95
TAF4O00268 AL591043.1-201ENST00000432461 424 ntBASIC2.85□□□□□ -1.95
TAF4O00268 NDUFA5P4-201ENST00000436704 385 ntBASIC2.85□□□□□ -1.95
TAF4O00268 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.85□□□□□ -1.95
TAF4O00268 MRPL42P6-201ENST00000486397 371 ntBASIC2.85□□□□□ -1.95
TAF4O00268 RNU6-1332P-201ENST00000516666 104 ntBASIC2.85□□□□□ -1.95
TAF4O00268 ACA59.2-201ENST00000517061 156 ntBASIC2.85□□□□□ -1.95
TAF4O00268 SNORA25.17-201ENST00000517184 124 ntBASIC2.85□□□□□ -1.95
TAF4O00268 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TAF4O00268 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.85□□□□□ -1.95
TAF4O00268 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.85□□□□□ -1.95
TAF4O00268 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms