Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU2-33P-201ENST00000410344 192 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 FAM204CP-201ENST00000424489 642 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 CETN4P-201ENST00000432407 469 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 RPL30P1-201ENST00000488676 339 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.07□□□□□ -2.4
RGPD3A6NKT7 RNU6-581P-201ENST00000516214 105 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.07□□□□□ -2.4
RGPD3A6NKT7 AC239868.4-201ENST00000608318 671 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 AC123767.1-202ENST00000620407 817 ntBASIC0.07□□□□□ -2.4
RGPD3A6NKT7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
RGPD3A6NKT7 MTCYBP38-201ENST00000417160 1123 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC007435.1-201ENST00000421086 415 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.06□□□□□ -2.4
RGPD3A6NKT7 MIR3664-201ENST00000579074 99 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.06□□□□□ -2.4
RGPD3A6NKT7 RNU6-910P-201ENST00000390844 107 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 MIR942-201ENST00000401111 86 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC063976.4-201ENST00000421971 163 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 PTGES3P1-201ENST00000439531 483 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC244505.3-201ENST00000454598 187 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 RNA5SP290-201ENST00000517133 127 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 RN7SKP258-201ENST00000517151 304 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 AC079598.5-201ENST00000547460 117 ntBASIC0.06□□□□□ -2.4
RGPD3A6NKT7 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.05□□□□□ -2.4
RGPD3A6NKT7 RNU1-119P-201ENST00000391122 165 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.05□□□□□ -2.4
RGPD3A6NKT7 AC113410.1-201ENST00000505029 247 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.05□□□□□ -2.4
RGPD3A6NKT7 SNORD39.3-201ENST00000584451 71 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 Z98751.3-201ENST00000604447 521 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 AC079610.2-201ENST00000604818 690 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 AC017083.3-201ENST00000609955 700 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.05□□□□□ -2.4
RGPD3A6NKT7 DBF4P1-201ENST00000412976 1892 ntBASIC0.05□□□□□ -2.4
RGPD3A6NKT7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 RNU6-1280P-201ENST00000365211 107 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 PNRC2P1-201ENST00000423940 420 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 SKA2P1-201ENST00000425592 390 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 RNA5SP503-201ENST00000517047 117 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AL671309.1-201ENST00000603750 544 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC112220.2-201ENST00000605513 533 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AP001596.2-201ENST00000608410 312 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC040896.1-201ENST00000613819 479 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 RNU6-1065P-201ENST00000384513 106 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC099677.2-201ENST00000436385 175 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AP003392.2-201ENST00000527269 208 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC108676.2-201ENST00000605225 163 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AL133445.2-201ENST00000611191 527 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 AC092608.3-201ENST00000625017 386 ntBASIC0.04□□□□□ -2.4
RGPD3A6NKT7 TAF13P2-201ENST00000416876 286 ntBASIC0.03□□□□□ -2.4
RGPD3A6NKT7 MTCO3P18-201ENST00000440206 761 ntBASIC0.03□□□□□ -2.4
RGPD3A6NKT7 RNU6-333P-201ENST00000459117 107 ntBASIC0.03□□□□□ -2.4
RGPD3A6NKT7 MTCO3P7-201ENST00000510008 774 ntBASIC0.03□□□□□ -2.4
RGPD3A6NKT7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.03□□□□□ -2.4
RGPD3A6NKT7 AP001180.6-201ENST00000584918 159 ntBASIC0.03□□□□□ -2.4
RGPD3A6NKT7 SNORA8.3-201ENST00000384679 139 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 CCDC58P2-201ENST00000417131 366 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AC104651.1-201ENST00000427559 735 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AC114982.2-201ENST00000461396 358 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 SNORA14.1-201ENST00000516113 141 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 IGLVI-20-201ENST00000519296 130 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AC090330.1-201ENST00000588646 764 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AP001429.1-201ENST00000602568 530 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 AC013476.2-201ENST00000614456 459 ntBASIC0.02□□□□□ -2.41
RGPD3A6NKT7 RNU6-529P-201ENST00000363383 104 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 U3.9-201ENST00000363823 204 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 SNORD95.1-201ENST00000364099 68 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 SNORD99-201ENST00000408612 74 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 RPL21P111-201ENST00000418453 477 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 MIR3169-201ENST00000578032 83 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 MIR5094-201ENST00000578766 85 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 AC106858.1-201ENST00000637497 429 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 SNORD114-19-201ENST00000363072 75 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.01□□□□□ -2.41
RGPD3A6NKT7 ELOCP14-201ENST00000428070 331 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 ELOCP7-201ENST00000439968 331 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.01□□□□□ -2.41
RGPD3A6NKT7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.01□□□□□ -2.41
RGPD3A6NKT7 AC100812.1-201ENST00000607622 580 ntBASIC0.01□□□□□ -2.41
RGPD3A6NKT7 Y_RNA.99-201ENST00000363138 105 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms