Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC058791.1-201ENST00000608412 3198 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC099654.7-201ENST00000635788 2127 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.128-201ENST00000363391 112 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-1227P-201ENST00000383981 107 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-1222P-201ENST00000384615 107 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC017079.2-201ENST00000416102 485 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 Z82205.1-201ENST00000428456 297 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 RPL23AP50-201ENST00000434149 455 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC243964.1-201ENST00000441814 261 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 RPL7P42-201ENST00000481005 679 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 MTCO3P13-201ENST00000577757 781 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 7SK.7-201ENST00000603504 247 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC006077.1-201ENST00000604746 343 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 MIR3651-201ENST00000630427 90 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 AC241585.2-209ENST00000638217 143 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 MTND5P19-201ENST00000424872 1794 ntBASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA3Q9Y5H0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC002543.1-201ENST00000299783 1954 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-142P-201ENST00000384019 107 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-842P-201ENST00000384269 107 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-784P-201ENST00000384330 106 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 MTND3P9-201ENST00000429526 346 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC011816.1-201ENST00000441346 546 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC008155.2-201ENST00000464337 397 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 RPS26P21-201ENST00000475397 348 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC005741.1-201ENST00000511094 432 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-976P-201ENST00000516086 111 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AP000889.1-201ENST00000530968 660 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC016256.1-201ENST00000547971 354 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 KLKP1-201ENST00000595979 403 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AL080274.1-201ENST00000605565 220 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 AC134503.1-201ENST00000633048 54 ntBASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA3Q9Y5H0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC073073.2-201ENST00000609827 2578 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 MAPK10-362ENST00000641864 4484 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 SNORA48.8-201ENST00000391324 134 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 RNA5SP120-201ENST00000410900 112 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 Z92545.1-201ENST00000411782 234 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC005326.1-201ENST00000429197 123 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC007677.1-201ENST00000445757 515 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 MTCO3P10-201ENST00000455912 772 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 RPS29P27-201ENST00000463711 170 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC109329.1-201ENST00000518744 317 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC115990.1-201ENST00000526957 301 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC023442.1-201ENST00000531247 422 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC090897.2-201ENST00000581715 130 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC012493.2-201ENST00000595083 291 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AC009541.1-201ENST00000438279 2662 ntBASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA3Q9Y5H0 MTND5P9-201ENST00000503854 1755 ntBASIC3.4□□□□□ -1.86
PCDHGA3Q9Y5H0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHGA3Q9Y5H0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA3Q9Y5H0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms