Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB13Q9Y5F0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB13Q9Y5F0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 AL356292.1-201ENST00000283110 373 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 SNORA27.1-201ENST00000362604 124 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 RNU4-15P-201ENST00000362613 141 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 Y_RNA.111-201ENST00000363248 100 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6-1276P-201ENST00000365372 104 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6-242P-201ENST00000384359 107 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 MIR195-201ENST00000385194 87 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 RN7SL177P-201ENST00000476596 299 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 AC139453.2-201ENST00000487255 133 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 RPL23AP91-201ENST00000569211 455 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 BMS1P21-201ENST00000634565 365 ntBASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB13Q9Y5F0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 AC008079.2-201ENST00000623543 20396 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 RN7SKP113-201ENST00000363891 295 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 MIR586-201ENST00000385035 97 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 SNORA11B-201ENST00000408175 129 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 AL645939.1-201ENST00000453429 797 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 snoU13.14-201ENST00000459372 104 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 IGLL4P-201ENST00000614590 133 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 Pinc.1-201ENST00000616452 154 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB13Q9Y5F0 AC063976.2-201ENST00000425667 3556 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 Y_RNA.66-201ENST00000362862 102 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6-1305P-201ENST00000364353 104 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 BX510359.3-201ENST00000422168 306 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 COX6CP13-201ENST00000428703 226 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 AL445584.1-201ENST00000431451 330 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 AL354714.3-201ENST00000447284 493 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 RN7SL443P-201ENST00000464331 290 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 RN7SL629P-201ENST00000489622 285 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 AC011406.1-201ENST00000512440 370 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 AC084364.2-201ENST00000546924 395 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 MIR4662B-201ENST00000579498 81 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 MIR3129-201ENST00000581095 76 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 MIR2681-201ENST00000581814 105 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 RPL17P51-201ENST00000605218 238 ntBASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB13Q9Y5F0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6-414P-201ENST00000363705 104 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6-497P-201ENST00000365316 104 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6-171P-201ENST00000384354 107 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 MIR493-201ENST00000385254 89 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 AL139148.1-201ENST00000427122 680 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 SNORD11-201ENST00000459124 84 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RN7SL214P-201ENST00000487317 265 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RNA5SP34-201ENST00000516887 130 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 AC011447.4-201ENST00000587562 111 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 AC107294.3-201ENST00000609211 526 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 RPSAP73-201ENST00000614820 330 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 AC002064.3-201ENST00000623448 346 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 MIR6715B-201ENST00000637172 77 ntBASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB13Q9Y5F0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 FAM35BP-202ENST00000497389 3337 ntBASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 Z95331.1-201ENST00000623075 23112 ntBASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 AL672296.1-201ENST00000427780 2158 ntBASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHB13Q9Y5F0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB13Q9Y5F0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHB13Q9Y5F0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHB13Q9Y5F0 RNU6-1125P-201ENST00000363601 107 ntBASIC5.64□□□□□ -1.51
PCDHB13Q9Y5F0 RN7SKP224-201ENST00000364140 325 ntBASIC5.64□□□□□ -1.51
PCDHB13Q9Y5F0 Y_RNA.213-201ENST00000364178 111 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms