Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 Y_RNA.75-201ENST00000362927 97 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.223-201ENST00000364290 113 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.629-201ENST00000411368 105 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC010975.2-201ENST00000427781 588 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC099513.1-201ENST00000490423 301 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC097484.2-201ENST00000509147 251 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC008739.2-201ENST00000597006 317 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC010133.1-201ENST00000615809 842 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 DYNLT3P1-201ENST00000378574 347 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 SDAD1P3-201ENST00000427380 333 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RPL7P55-201ENST00000450522 746 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU2-13P-201ENST00000515909 113 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC004217.3-201ENST00000551552 878 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL391001.1-201ENST00000602747 715 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6-338P-201ENST00000383888 105 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 MIR4764-201ENST00000580680 88 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL354696.1-201ENST00000614652 497 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 MIR520F-201ENST00000384824 87 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL606845.1-201ENST00000404881 255 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.591-201ENST00000410228 104 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RPL21P111-201ENST00000418453 477 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC093899.1-201ENST00000457984 376 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC022447.1-201ENST00000515358 464 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNA5SP385-201ENST00000515947 110 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 MIR4520-1-201ENST00000582609 70 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC091135.1-201ENST00000585943 307 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 C2orf27A-204ENST00000623058 969 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6-417P-201ENST00000384712 107 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 MIR579-201ENST00000385221 98 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AP003733.2-201ENST00000529409 171 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AC006249.1-201ENST00000621223 471 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 U3.9-201ENST00000363823 204 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RNU6-949P-201ENST00000384040 107 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RPS24P6-201ENST00000452670 400 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC116655.1-201ENST00000508324 901 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC125611.2-201ENST00000551907 647 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC010928.2-201ENST00000588017 287 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC011330.2-201ENST00000621680 635 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 Y_RNA.137-201ENST00000363455 112 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RNU6-1285P-201ENST00000363480 105 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL591034.1-201ENST00000407447 340 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC098592.2-201ENST00000413158 265 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL606517.1-201ENST00000446914 387 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RPL23AP41-201ENST00000484754 458 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL355802.3-201ENST00000607571 545 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 SNORA8-201ENST00000384574 139 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RPL22P22-201ENST00000395439 379 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 PRELID3BP11-201ENST00000414230 479 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 UBE2D3P2-201ENST00000424409 445 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 MTCO3P45-201ENST00000443036 613 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 MTND5P8-201ENST00000449817 1083 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RPS27P22-201ENST00000478056 241 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 CBX3P3-201ENST00000508108 532 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL590229.1-201ENST00000603497 542 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 SNORA16B-201ENST00000364674 135 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 SNORA22C-201ENST00000384614 134 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC005094.1-201ENST00000440420 368 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.21□□□□□ -2.38
MACF1Q9UPN3 AC067940.1-201ENST00000458411 300 ntBASIC0.21□□□□□ -2.38
MACF1Q9UPN3 RPL7P42-201ENST00000481005 679 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms