Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC090616.2-202ENST00000584248 222 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC005771.1-201ENST00000585581 349 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC009977.1-201ENST00000586015 570 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC091304.9-201ENST00000612091 226 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC019226.2-201ENST00000625973 424 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AL354685.2-201ENST00000448218 1447 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 RNU6-179P-201ENST00000363350 107 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 SNORA20.2-201ENST00000383922 131 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 CBX3P9-201ENST00000402326 552 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 MTCYBP5-201ENST00000423752 1135 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AL645568.3-201ENST00000433683 316 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 snoU13.14-201ENST00000459372 104 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 FABP5P5-201ENST00000515537 406 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 SNORA25.15-201ENST00000516487 89 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 RNU6-1220P-201ENST00000517126 108 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 CYCSP27-201ENST00000527643 293 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 MIR5692A1-201ENST00000580523 69 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 MIR3683-201ENST00000580847 82 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AL670379.2-201ENST00000604983 252 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AL670379.4-201ENST00000605279 254 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AC005296.1-201ENST00000616145 209 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.86□□□□□ -2.11
CDH9Q9ULB4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
CDH9Q9ULB4 FARSBP1-201ENST00000435808 1778 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RAP1BP3-201ENST00000407180 549 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RNU2-48P-201ENST00000410694 191 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RNU2-32P-201ENST00000411193 191 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RPL21P90-201ENST00000415692 466 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 HMGB1P31-201ENST00000437242 427 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC104058.1-201ENST00000448028 297 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RAP1BP2-201ENST00000478270 544 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RNU1-86P-201ENST00000516108 154 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RNU1-107P-201ENST00000516617 154 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 RNU6-685P-201ENST00000517088 95 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AP003392.2-201ENST00000527269 208 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 CLIC4P2-201ENST00000601934 717 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AL121992.2-201ENST00000606262 256 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC012360.2-201ENST00000609349 391 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC026585.1-201ENST00000619582 524 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC131159.1-201ENST00000621854 213 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC007792.1-201ENST00000623023 402 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AC093648.1-201ENST00000623546 606 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 AL359740.1-201ENST00000624340 592 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDH9Q9ULB4 MTND4P4-201ENST00000439033 1366 ntBASIC1.85□□□□□ -2.11
CDH9Q9ULB4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 RNU6-212P-201ENST00000362642 104 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 RNU6-546P-201ENST00000383991 107 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 MTATP6P16-201ENST00000434543 526 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC104850.1-201ENST00000435940 476 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC116562.3-201ENST00000506136 177 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 SCARNA24.1-201ENST00000516465 137 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 RNU2-46P-201ENST00000517038 113 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 RN7SKP256-201ENST00000517201 314 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC068587.5-201ENST00000528506 175 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH9Q9ULB4 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC012065.4-201ENST00000602445 679 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 WISP1-OT1-201ENST00000602893 642 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC005034.5-201ENST00000604219 466 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC092354.1-201ENST00000606057 376 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 Z82243.1-201ENST00000609432 473 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 AC009159.2-201ENST00000617603 606 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 RMST_7.1-201ENST00000621935 268 ntBASIC1.84□□□□□ -2.11
CDH9Q9ULB4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CDH9Q9ULB4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms