Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MTCO2P19-201ENST00000427513 598 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AL591043.1-201ENST00000432461 424 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 USP9YP8-201ENST00000441913 500 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 TPT1P7-201ENST00000458300 517 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 SCARNA18-201ENST00000459004 134 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AP001486.1-201ENST00000463339 476 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RPL23AP49-201ENST00000492925 468 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC091133.4-201ENST00000511142 308 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-586P-201ENST00000517265 104 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC023050.3-201ENST00000541142 333 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC078814.3-201ENST00000553036 491 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 MTATP6P3-201ENST00000581686 676 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AL136363.2-201ENST00000604173 851 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-6P-201ENST00000606623 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AL161423.1-201ENST00000613700 262 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 CTSLP2-204ENST00000629029 392 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ZCCHC3Q9NUD5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-212P-201ENST00000362642 104 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 U3.12-201ENST00000364498 214 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 SNORA25B-201ENST00000365507 128 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 Y_RNA.399-201ENST00000383955 105 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-517P-201ENST00000384362 110 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 Y_RNA.582-201ENST00000391023 95 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AC068050.1-201ENST00000394891 380 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 EDDM3CP-201ENST00000415977 425 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AC009963.1-201ENST00000417265 157 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 SNRPFP3-201ENST00000457792 225 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 RPL30P12-201ENST00000474666 353 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AC108078.1-201ENST00000508073 725 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 SNORA25.17-201ENST00000517184 124 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AL137161.1-201ENST00000532231 390 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 AGGF1P4-201ENST00000568249 801 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-527P-201ENST00000363425 104 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-105P-201ENST00000363909 104 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AL355497.1-201ENST00000406262 551 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 RNA5SP270-201ENST00000411361 118 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 SNORD56-201ENST00000413522 71 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC002486.1-201ENST00000435098 391 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 RNU7-63P-201ENST00000459054 62 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AL049873.1-201ENST00000480540 376 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC079140.5-201ENST00000507882 310 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 MIR3162-201ENST00000581818 82 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC025165.5-201ENST00000602802 578 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC123912.5-201ENST00000605470 343 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AC245008.1-201ENST00000608123 476 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
ZCCHC3Q9NUD5 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-525P-201ENST00000363685 104 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 Y_RNA.296-201ENST00000364930 108 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 SNORD116-2-201ENST00000384274 95 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-1119P-201ENST00000384349 108 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-1274P-201ENST00000384557 107 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 SNORD116-6-201ENST00000384711 96 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AL591416.1-201ENST00000404015 867 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AL353193.1-201ENST00000421444 268 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AL451074.3-201ENST00000437709 472 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 RPL39P29-201ENST00000447779 157 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC073415.1-201ENST00000449240 153 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 RPL30P1-201ENST00000488676 339 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms