Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 Z98749.2-208ENST00000381646 500 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 RAP1BP3-201ENST00000407180 549 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 RPL26P27-201ENST00000414397 437 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 NDUFB1P2-201ENST00000449477 176 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 MTATP6P7-201ENST00000453315 681 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC233279.1-201ENST00000455300 423 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 RNU7-138P-201ENST00000459479 64 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 MTND4P17-201ENST00000470444 350 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 RPS27AP10-201ENST00000496103 208 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC079140.5-201ENST00000507882 310 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 MTND3P22-201ENST00000510932 243 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.675-201ENST00000516389 149 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC105029.1-201ENST00000520250 669 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC104576.1-201ENST00000524225 88 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 LINC00933-203ENST00000559812 219 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 MIR4790-201ENST00000577799 79 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 LARP7P3-201ENST00000579888 337 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC138761.3-201ENST00000579993 334 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC010620.2-201ENST00000600135 313 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 RMST_4.1-201ENST00000616886 107 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC006386.2-201ENST00000624491 75 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 AC012005.1-201ENST00000624575 75 ntBASIC2.78□□□□□ -1.96
PCDH9Q9HC56 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
PCDH9Q9HC56 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC026241.1-201ENST00000517873 2142 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 RNU4-73P-201ENST00000363164 141 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 Y_RNA.212-201ENST00000364177 102 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 RNU6-214P-201ENST00000384130 107 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL138827.1-201ENST00000402666 306 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 RNU2-41P-201ENST00000410991 178 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL590632.1-201ENST00000424289 371 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC105272.1-201ENST00000438604 198 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 RPL32P28-201ENST00000443577 397 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL031274.1-201ENST00000450334 232 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 BTF3P15-201ENST00000455606 336 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC128713.1-201ENST00000471495 306 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 Y_RNA.687-201ENST00000516558 91 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 RNU6-566P-201ENST00000516790 107 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC026371.1-201ENST00000551867 419 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 EIF4BP1-201ENST00000554881 351 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL160281.1-201ENST00000605307 311 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL022345.1-201ENST00000607292 135 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL138726.1-201ENST00000614873 333 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 AL161629.2-201ENST00000615347 275 ntBASIC2.77□□□□□ -1.97
PCDH9Q9HC56 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 RNU6-562P-201ENST00000362731 107 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 RNU1-112P-201ENST00000364401 164 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 SNORD116-11-201ENST00000383882 92 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 MT-TD-201ENST00000387419 68 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 MIR548F5-201ENST00000408421 86 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 NDUFS5P4-201ENST00000412983 318 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AL359672.1-201ENST00000442302 409 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AMD1P1-201ENST00000457220 922 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AIG1P1-201ENST00000503376 148 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC008526.1-201ENST00000509149 338 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC092436.3-201ENST00000511788 257 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 RNA5SP454-201ENST00000517231 127 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 COPS8P3-201ENST00000526024 482 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AP005597.4-201ENST00000526762 229 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDH9Q9HC56 ELOCP29-201ENST00000588193 334 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC008739.2-201ENST00000597006 317 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AL117336.2-201ENST00000602435 335 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 AC008121.1-201ENST00000603244 268 ntBASIC2.76□□□□□ -1.97
PCDH9Q9HC56 C8orf59P2-201ENST00000603441 271 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms