Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
RPAP1Q9BWH6 MIR95-201ENST00000385072 81 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 Y_RNA.598-201ENST00000410480 95 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 SNORD56-201ENST00000413522 71 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 MTND4P20-201ENST00000424125 869 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 MED13P1-201ENST00000428342 171 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AC009238.1-201ENST00000442165 424 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AC009237.6-201ENST00000446969 424 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 NDUFB1P2-201ENST00000449477 176 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 MED28P2-201ENST00000475771 317 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AC117522.1-201ENST00000509821 380 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 CR383656.8-201ENST00000549046 145 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AC068944.2-201ENST00000610373 403 ntBASIC1.97□□□□□ -2.09
RPAP1Q9BWH6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 RNU6-72P-201ENST00000384285 79 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 RNU6-843P-201ENST00000384454 104 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 RPS3AP36-201ENST00000398190 775 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 RNU2-8P-201ENST00000410727 190 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC138623.1-201ENST00000418060 216 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 MTND2P9-201ENST00000422293 931 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 HMGB1P31-201ENST00000437242 427 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC012308.1-201ENST00000451232 178 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 snoU13.18-201ENST00000459483 104 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 FABP5P5-201ENST00000515537 406 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC008015.1-201ENST00000555505 465 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC136619.2-201ENST00000563361 631 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 MIR3126-201ENST00000577443 74 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 MIR548AC-201ENST00000585049 88 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC005771.1-201ENST00000585581 349 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC012065.4-201ENST00000602445 679 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC025165.5-201ENST00000602802 578 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AL138889.2-201ENST00000603883 242 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 BX248123.2-201ENST00000606318 124 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AL451064.1-201ENST00000607718 471 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 AC091304.9-201ENST00000612091 226 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 MIR3529-201ENST00000637713 78 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 RBBP8P1-201ENST00000449447 1844 ntBASIC1.96□□□□□ -2.1
RPAP1Q9BWH6 MTND4P4-201ENST00000439033 1366 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 Y_RNA.122-201ENST00000363331 96 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 RNY1P12-201ENST00000364251 105 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 SNORA16B-201ENST00000364674 135 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 RNU6-392P-201ENST00000364926 101 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 RNU6-641P-201ENST00000384006 107 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 MIR10A-201ENST00000385043 110 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 MIR561-201ENST00000385216 97 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AL031577.2-201ENST00000404133 280 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AL031779.1-201ENST00000415663 330 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 EDDM3CP-201ENST00000415977 425 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 BZW1P2-201ENST00000473537 826 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 RBBP4P6-201ENST00000508098 202 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 RNU2-46P-201ENST00000517038 113 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 SNORA31.25-201ENST00000517242 134 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AC022616.3-201ENST00000523940 148 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AC008521.1-201ENST00000587471 187 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AL353778.1-201ENST00000603149 408 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 NDUFA8P1-201ENST00000605525 367 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AC122133.1-201ENST00000613964 233 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AC079248.2-201ENST00000623779 326 ntBASIC1.95□□□□□ -2.1
RPAP1Q9BWH6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 Y_RNA.22-201ENST00000362492 102 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RNU6-371P-201ENST00000364283 108 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 SNORD14B-201ENST00000364533 90 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RNU6-1032P-201ENST00000384100 107 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RNU6-1179P-201ENST00000384667 107 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 MIR578-201ENST00000384828 96 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RN7SKP101-201ENST00000411376 320 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 BX510359.4-201ENST00000423750 193 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 DNAJC19P4-201ENST00000440115 345 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 MTND1P30-201ENST00000441241 901 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 HMGB1P30-201ENST00000492455 606 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RNU6-1220P-201ENST00000517126 108 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RNU6-232P-201ENST00000517144 64 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC106038.2-201ENST00000520706 568 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms