Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC002381.1-201ENST00000447049 280 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA3Q99758 AL512310.8-201ENST00000550183 120 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.33□□□□□ -2.36
ABCA3Q99758 AL355802.4-201ENST00000607635 548 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AL138726.1-201ENST00000614873 333 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA3Q99758 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.32□□□□□ -2.36
ABCA3Q99758 Y_RNA.245-201ENST00000364493 95 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 RNU6-160P-201ENST00000384591 107 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 AL592310.1-201ENST00000414330 671 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 AC092634.6-201ENST00000418558 192 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.32□□□□□ -2.36
ABCA3Q99758 RPL32P14-201ENST00000463196 378 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 RN7SKP88-201ENST00000516847 250 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.32□□□□□ -2.36
ABCA3Q99758 7SK.8-201ENST00000612110 250 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 7SK.11-201ENST00000615477 250 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 AC123767.1-202ENST00000620407 817 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 7SK.13-201ENST00000622040 250 ntBASIC0.32□□□□□ -2.36
ABCA3Q99758 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.32□□□□□ -2.36
ABCA3Q99758 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
ABCA3Q99758 MIR302D-201ENST00000362275 68 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 SNORA48.1-201ENST00000390879 135 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ABCA3Q99758 RNVU1-2-201ENST00000516326 135 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.31□□□□□ -2.36
ABCA3Q99758 AC079598.5-201ENST00000547460 117 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 VN1R82P-201ENST00000601481 356 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 Z83818.1-201ENST00000603584 150 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 AC090578.1-201ENST00000604955 591 ntBASIC0.31□□□□□ -2.36
ABCA3Q99758 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ABCA3Q99758 AC138393.1-203ENST00000327086 343 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
ABCA3Q99758 RNU2-7P-201ENST00000410794 178 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 TAF13P2-201ENST00000416876 286 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 HSPE1P9-201ENST00000440046 311 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.3□□□□□ -2.36
ABCA3Q99758 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.3□□□□□ -2.36
ABCA3Q99758 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.3□□□□□ -2.36
ABCA3Q99758 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA3Q99758 CLIC4P2-201ENST00000601934 717 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 AP003465.2-201ENST00000602571 373 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 Pinc.1-201ENST00000616452 154 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA3Q99758 RPL26P27-201ENST00000414397 437 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 TIMM9P1-201ENST00000436122 256 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.3□□□□□ -2.36
ABCA3Q99758 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.3□□□□□ -2.36
ABCA3Q99758 RPL30P11-203ENST00000598995 310 ntBASIC0.3□□□□□ -2.36
ABCA3Q99758 SNORD114-19-201ENST00000363072 75 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 RNU6-112P-201ENST00000363599 104 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 MIR200A-201ENST00000384875 90 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 PNRC2P1-201ENST00000423940 420 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 SNX2P2-201ENST00000424553 323 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA3Q99758 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.29□□□□□ -2.36
ABCA3Q99758 RPL31P3-201ENST00000458430 332 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 SNORA70.22-201ENST00000517160 124 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.29□□□□□ -2.36
ABCA3Q99758 AP001893.2-201ENST00000526949 202 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 AC095057.3-201ENST00000567102 1157 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 AC008088.1-201ENST00000580993 280 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 AP000860.1-201ENST00000605250 559 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 AC009237.15-201ENST00000610252 501 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.29□□□□□ -2.36
ABCA3Q99758 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.29□□□□□ -2.36
ABCA3Q99758 AC092447.10-201ENST00000620607 1652 ntBASIC0.29□□□□□ -2.36
ABCA3Q99758 RNA5SP493-201ENST00000364115 91 ntBASIC0.28□□□□□ -2.36
ABCA3Q99758 RNU6-43P-201ENST00000384302 107 ntBASIC0.28□□□□□ -2.36
ABCA3Q99758 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.36
ABCA3Q99758 GAPDHP17-201ENST00000449858 1001 ntBASIC0.28□□□□□ -2.36
ABCA3Q99758 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.28□□□□□ -2.36
ABCA3Q99758 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.28□□□□□ -2.36
ABCA3Q99758 BPTFP1-201ENST00000579209 492 ntBASIC0.28□□□□□ -2.36
ABCA3Q99758 Z82243.1-201ENST00000609432 473 ntBASIC0.28□□□□□ -2.36
ABCA3Q99758 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA3Q99758 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.27□□□□□ -2.37
ABCA3Q99758 MTND3P4-201ENST00000453537 303 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AC244505.3-201ENST00000454598 187 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.27□□□□□ -2.37
ABCA3Q99758 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
ABCA3Q99758 RNU6-703P-201ENST00000516946 107 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AL020997.3-201ENST00000602843 359 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AL357094.1-201ENST00000603845 844 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AL158211.4-201ENST00000606988 584 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AL133445.2-201ENST00000611191 527 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AL357075.2-201ENST00000614906 189 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 uc_338.15-201ENST00000615470 191 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 Y_RNA.142-201ENST00000363491 102 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 Y_RNA.324-201ENST00000365165 102 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 RNU6-439P-201ENST00000384188 106 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.27□□□□□ -2.37
ABCA3Q99758 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.27□□□□□ -2.37
ABCA3Q99758 RSL24D1P8-201ENST00000434442 492 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 SNORA14.1-201ENST00000516113 141 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 RNU6-197P-201ENST00000516680 100 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.27□□□□□ -2.37
ABCA3Q99758 AL365434.2-201ENST00000607979 234 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms