Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MTND1P17-201ENST00000448961 204 ntBASIC3.5□□□□□ -1.85
NUP88Q99567 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP88Q99567 RN7SL20P-201ENST00000488827 297 ntBASIC3.5□□□□□ -1.85
NUP88Q99567 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP88Q99567 AC009163.5-201ENST00000575421 637 ntBASIC3.5□□□□□ -1.85
NUP88Q99567 AC009233.1-201ENST00000616477 371 ntBASIC3.5□□□□□ -1.85
NUP88Q99567 UCA1.1-201ENST00000620952 75 ntBASIC3.5□□□□□ -1.85
NUP88Q99567 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP88Q99567 MTND5P27-201ENST00000428871 1720 ntBASIC3.5□□□□□ -1.85
NUP88Q99567 AC008669.1-201ENST00000565823 2178 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP88Q99567 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP88Q99567 RNU6-942P-201ENST00000363002 107 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 RNU4-73P-201ENST00000363164 141 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 RNU6-306P-201ENST00000384617 107 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 SNORA46-201ENST00000384762 135 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 AL360182.1-201ENST00000397433 468 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 AL365496.1-201ENST00000426885 215 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP88Q99567 RPS12P18-201ENST00000442381 270 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP88Q99567 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP88Q99567 RNU7-187P-201ENST00000458985 68 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 U8.21-201ENST00000459536 136 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP88Q99567 IGHV3-76-201ENST00000522465 295 ntBASIC3.49□□□□□ -1.85
NUP88Q99567 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.49□□□□□ -1.85
NUP88Q99567 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP88Q99567 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP88Q99567 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NUP88Q99567 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP88Q99567 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP88Q99567 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP88Q99567 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP88Q99567 RPL9P7-201ENST00000330965 580 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 Y_RNA.151-201ENST00000363566 112 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 RNU6-336P-201ENST00000364891 107 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AC009414.1-201ENST00000427200 443 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 Z82205.1-201ENST00000428456 297 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 AL645568.3-201ENST00000433683 316 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AL513043.1-201ENST00000439124 535 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AL135938.1-201ENST00000443141 297 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 UQCRHP3-201ENST00000451503 251 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 PCMTD1P1-201ENST00000455560 355 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 RPS29P12-201ENST00000460178 152 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 RN7SL75P-201ENST00000461926 281 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 RPL9P9-202ENST00000466501 579 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.48□□□□□ -1.85
NUP88Q99567 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 TRAV32-201ENST00000553993 340 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP88Q99567 AL355375.2-201ENST00000574825 175 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 MIR4298-201ENST00000584380 73 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 AC091152.3-201ENST00000604227 325 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AC113139.1-201ENST00000605049 239 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AC019193.3-201ENST00000609144 554 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 AC099778.2-201ENST00000610904 211 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 MIR3529-201ENST00000637713 78 ntBASIC3.48□□□□□ -1.85
NUP88Q99567 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP88Q99567 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP88Q99567 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP88Q99567 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP88Q99567 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NUP88Q99567 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP88Q99567 SNORD62.1-201ENST00000362541 86 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 SNORA5B-201ENST00000363786 132 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 SNORA18.3-201ENST00000384122 132 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 RNU6-601P-201ENST00000384540 107 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NUP88Q99567 MIR1289-1-201ENST00000408836 144 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 RNU6-325P-201ENST00000411132 105 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 AL030996.1-201ENST00000411430 235 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP88Q99567 UBE2DNL-203ENST00000474922 222 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP88Q99567 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
NUP88Q99567 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP88Q99567 MTCYBP40-201ENST00000509390 1135 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 RPL23AP94-201ENST00000512518 302 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 SMURF2P1-201ENST00000514992 481 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NUP88Q99567 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP88Q99567 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP88Q99567 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP88Q99567 MIR4795-201ENST00000584182 89 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 AC016727.1-205ENST00000605437 569 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 AC093831.2-201ENST00000624393 3427 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 MTND4P23-201ENST00000447723 1363 ntBASIC3.47□□□□□ -1.85
NUP88Q99567 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP88Q99567 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.46□□□□□ -1.85
NUP88Q99567 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NUP88Q99567 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms