Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.5□□□□□ -2.33
IFT140Q96RY7 MIR5190-201ENST00000581537 80 ntBASIC0.5□□□□□ -2.33
IFT140Q96RY7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
IFT140Q96RY7 SNORA4.1-201ENST00000364263 144 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 RNU6-1280P-201ENST00000365211 107 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 MIR10B-201ENST00000385011 110 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 EIF1P1-201ENST00000421436 341 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 AL163195.1-201ENST00000496941 348 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 RNU6-760P-201ENST00000516078 97 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 AC006518.2-201ENST00000542513 940 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 AL583856.2-201ENST00000606298 543 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 AL022345.2-201ENST00000606307 135 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.49□□□□□ -2.33
IFT140Q96RY7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.49□□□□□ -2.33
IFT140Q96RY7 SNORA25-201ENST00000384384 134 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RNA5SP25-201ENST00000410815 110 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RAP1BP2-201ENST00000478270 544 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RPL26P26-201ENST00000480251 434 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC116655.1-201ENST00000508324 901 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RNU5B-3P-201ENST00000516601 115 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC027335.2-201ENST00000624030 375 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC009033.1-201ENST00000624279 431 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
IFT140Q96RY7 RNU6-23P-201ENST00000363283 107 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RNU6-637P-201ENST00000384050 107 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RNU6-1065P-201ENST00000384513 106 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 MIR1265-201ENST00000408444 86 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 RPL21P24-201ENST00000413752 448 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 OR6C5P-201ENST00000452388 923 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC013267.1-201ENST00000458227 267 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC008628.1-201ENST00000508663 265 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 MIR5589-201ENST00000579442 60 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 RNU6-91P-201ENST00000607774 107 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 Z82243.1-201ENST00000609432 473 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 AC126177.8-201ENST00000618339 1015 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 AL596245.1-201ENST00000618994 362 ntBASIC0.48□□□□□ -2.33
IFT140Q96RY7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.48□□□□□ -2.33
IFT140Q96RY7 DBF4P1-201ENST00000412976 1892 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
IFT140Q96RY7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC119751.3-201ENST00000399720 670 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AL133264.1-201ENST00000407157 562 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.47□□□□□ -2.33
IFT140Q96RY7 MTCO3P1-205ENST00000422088 832 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC244023.1-201ENST00000426884 112 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC010460.2-201ENST00000509054 677 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC093249.1-201ENST00000567049 203 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC008088.1-201ENST00000580993 280 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC091057.3-201ENST00000602684 733 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC242498.1-201ENST00000604134 111 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 AC243994.1-201ENST00000618627 109 ntBASIC0.47□□□□□ -2.33
IFT140Q96RY7 RNU6-112P-201ENST00000363599 104 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
IFT140Q96RY7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
IFT140Q96RY7 AL031577.2-201ENST00000404133 280 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AC092634.6-201ENST00000418558 192 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AC008267.5-201ENST00000424928 265 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AL096829.2-201ENST00000446582 742 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AC022616.8-201ENST00000533569 253 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.46□□□□□ -2.34
IFT140Q96RY7 AC090615.1-201ENST00000577519 154 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AC107952.2-201ENST00000606048 486 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 AL163051.2-201ENST00000618976 735 ntBASIC0.46□□□□□ -2.34
IFT140Q96RY7 SNORD114-19-201ENST00000363072 75 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 RNU6-743P-201ENST00000364151 106 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AL161935.2-201ENST00000414627 60 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.45□□□□□ -2.34
IFT140Q96RY7 AC010099.3-201ENST00000423896 409 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.45□□□□□ -2.34
IFT140Q96RY7 RPL36AP53-201ENST00000432891 316 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 UBE2V1P8-201ENST00000437166 265 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AC002542.1-201ENST00000440683 193 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.45□□□□□ -2.34
IFT140Q96RY7 RPL30P1-201ENST00000488676 339 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.45□□□□□ -2.34
IFT140Q96RY7 AC121161.1-201ENST00000510606 652 ntBASIC0.45□□□□□ -2.34
IFT140Q96RY7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms