Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC135507.2-201ENST00000612443 309 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AL161423.1-201ENST00000613700 262 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 MTND4LP32-201ENST00000636111 270 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 U4.7-201ENST00000638126 106 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC009487.2-201ENST00000420969 6821 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 MIR22-201ENST00000362190 85 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-858P-201ENST00000362436 107 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-942P-201ENST00000363002 107 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 RNU2-49P-201ENST00000410666 184 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-325P-201ENST00000411132 105 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AL030996.1-201ENST00000411430 235 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC009296.1-201ENST00000443146 155 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 NIPA2P5-201ENST00000452282 464 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-1016P-201ENST00000516689 94 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC007536.1-201ENST00000533382 349 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC025281.1-201ENST00000567026 265 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC078899.3-201ENST00000599065 212 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC009314.1-201ENST00000603871 304 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC019193.3-201ENST00000609144 554 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 AC090574.1-201ENST00000623186 233 ntBASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CDK5RAP3Q96JB5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 Y_RNA.259-201ENST00000364619 101 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 Y_RNA.813-201ENST00000364639 102 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-790P-201ENST00000384479 105 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 FTH1P15-201ENST00000406984 280 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 RPL21P2-201ENST00000440049 481 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 PCMTD1P1-201ENST00000455560 355 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 SNORD19B-201ENST00000459623 84 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 RN7SL20P-201ENST00000488827 297 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC006445.1-201ENST00000491925 405 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 APOOP3-201ENST00000536787 586 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC010620.2-201ENST00000600135 313 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC024153.1-201ENST00000603103 365 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AC007179.3-201ENST00000604976 235 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AL050343.2-201ENST00000607338 280 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 AL442067.2-201ENST00000614033 363 ntBASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDK5RAP3Q96JB5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL9P7-201ENST00000330965 580 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-527P-201ENST00000363425 104 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-593P-201ENST00000364716 112 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 Y_RNA.419-201ENST00000384041 102 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 Y_RNA.460-201ENST00000384255 102 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 MIR517A-201ENST00000385001 87 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL21P75-201ENST00000396599 483 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL21P28-201ENST00000401418 483 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 MTCO2P27-201ENST00000420740 428 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AL161651.1-201ENST00000440882 223 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC013470.1-201ENST00000453438 462 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL21P39-201ENST00000463605 483 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL9P9-202ENST00000466501 579 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC087190.1-201ENST00000484462 480 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 MRPL42P6-201ENST00000486397 371 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC093591.1-201ENST00000491435 481 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL23AP49-201ENST00000492925 468 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RPL21P16-201ENST00000495531 483 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC010186.2-204ENST00000537668 439 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC124303.1-201ENST00000605703 360 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC096577.2-201ENST00000611455 153 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 AC126177.8-201ENST00000618339 1015 ntBASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP3Q96JB5 MTND4P23-201ENST00000447723 1363 ntBASIC3.4□□□□□ -1.86
CDK5RAP3Q96JB5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-1317P-201ENST00000364582 104 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-336P-201ENST00000364891 107 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.473-201ENST00000384333 102 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-933P-201ENST00000384424 107 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms