Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC018437.1-201ENST00000492214 406 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AK3P2-201ENST00000507976 429 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 RNU6-237P-201ENST00000515985 71 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 RNU1-41P-201ENST00000516161 162 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 RNU1-48P-201ENST00000516400 162 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC010186.2-204ENST00000537668 439 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC079600.2-201ENST00000550076 130 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 IMMP1LP2-201ENST00000552954 492 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC244517.12-201ENST00000623581 663 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNU6-858P-201ENST00000362436 107 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNU6-593P-201ENST00000364716 112 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNY3P1-201ENST00000365085 102 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNY3-201ENST00000365484 102 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 XGY1-201ENST00000381172 446 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.482-201ENST00000384377 111 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNU6-933P-201ENST00000384424 107 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNU6-601P-201ENST00000384540 107 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AL117339.3-201ENST00000418733 162 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 MTND4P28-201ENST00000426217 387 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AC010095.1-201ENST00000443543 144 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.638-201ENST00000459374 113 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RPL23AP49-201ENST00000492925 468 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AC116655.1-201ENST00000508324 901 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 RNU6-581P-201ENST00000516214 105 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 SNORA43.2-201ENST00000516652 128 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 AC024153.1-201ENST00000603103 365 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 U4.7-201ENST00000638126 106 ntBASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
TRIM43Q96BQ3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 RNU4-79P-201ENST00000362764 141 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.535-201ENST00000384612 99 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 RNU2-49P-201ENST00000410666 184 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 RNU2-52P-201ENST00000410680 190 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AL030996.1-201ENST00000411430 235 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AL161651.1-201ENST00000440882 223 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC124916.1-201ENST00000444020 547 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 UBE2V1P7-201ENST00000446395 340 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AL513124.1-201ENST00000450410 614 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC012308.1-201ENST00000451232 178 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 RNU7-187P-201ENST00000458985 68 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC116337.1-201ENST00000509680 687 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC103996.1-201ENST00000555468 102 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 FRG2DP-202ENST00000566967 323 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 MIR4738-201ENST00000579134 87 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC009314.1-201ENST00000603871 304 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 AC019193.3-201ENST00000609144 554 ntBASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM43Q96BQ3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 RNU6-942P-201ENST00000363002 107 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 RNU6-527P-201ENST00000363425 104 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 RNU1-105P-201ENST00000363470 161 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 RNU6-370P-201ENST00000411008 104 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AC023141.4-201ENST00000412031 328 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AC245054.2-201ENST00000415639 319 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 MTCO2P27-201ENST00000420740 428 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 MRPL42P6-201ENST00000486397 371 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 TRAV32-201ENST00000553993 340 ntBASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM43Q96BQ3 AC124303.1-201ENST00000605703 360 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 638.1 ms