Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR6134-201ENST00000617606 109 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 MTND5P7-201ENST00000413558 1798 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
ATG4AQ8WYN0 AF127577.6-201ENST00000623352 2191 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 SNORA71.3-201ENST00000362582 128 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 MIR521-1-201ENST00000384902 87 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 RPS29P13-201ENST00000402041 169 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AL591034.2-201ENST00000402839 359 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 SNRPEP4-201ENST00000435815 279 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 Z75741.1-201ENST00000446793 314 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 RPL26P9-201ENST00000457466 433 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 HMGN2P13-201ENST00000476476 274 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 RPL30P14-201ENST00000482744 348 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 Y_RNA.661-201ENST00000516003 99 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AP005902.1-201ENST00000521358 186 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AL391261.3-201ENST00000557194 520 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 MIR4273-201ENST00000582824 84 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC024220.1-201ENST00000603675 484 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 SNORA51-201ENST00000606420 132 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 MIR8076-201ENST00000611401 83 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 AC091925.1-201ENST00000623204 462 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4AQ8WYN0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 Y_RNA.145-201ENST00000363527 102 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 RNU6-336P-201ENST00000364891 107 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 Y_RNA.496-201ENST00000384444 101 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC008267.5-201ENST00000424928 265 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 CYCSP35-201ENST00000451978 304 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 SNRPGP3-201ENST00000469405 227 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC068781.1-201ENST00000488231 618 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 RPS29P20-201ENST00000489592 171 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC022447.4-201ENST00000504053 364 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 SNORA43.2-201ENST00000516652 128 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 RNU6-612P-201ENST00000516909 102 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 NACAP3-201ENST00000552100 481 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 SUB1P3-201ENST00000564581 315 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 MIR3944-201ENST00000581277 108 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 VN1R107P-201ENST00000601784 209 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC024153.1-201ENST00000603103 365 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 SNORA50A-202ENST00000629536 136 ntBASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4AQ8WYN0 CDC27P3-201ENST00000635418 1910 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 RNU6-942P-201ENST00000363002 107 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 RNU6-105P-201ENST00000363909 104 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 RNY1P14-201ENST00000384426 108 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 MIR7-3-201ENST00000384898 110 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 EIF4EP2-201ENST00000422816 654 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 YME1L1P1-201ENST00000429435 297 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AL353705.1-201ENST00000433468 480 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 FO393415.2-201ENST00000480085 343 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 SNORA25.10-201ENST00000515926 124 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 SNORD116.3-201ENST00000517176 78 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC023442.1-201ENST00000531247 422 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 CBX3P8-201ENST00000532412 525 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC010186.2-204ENST00000537668 439 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 MTND4LP5-201ENST00000605152 292 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC007485.1-201ENST00000616755 206 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 AC090617.7-201ENST00000623952 126 ntBASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ATG4AQ8WYN0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms