Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC073614.1-201ENST00000438690 650 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 SNORA31.19-201ENST00000517079 126 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 MIR4782-201ENST00000577987 79 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC013553.2-201ENST00000604244 589 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AL161729.4-201ENST00000604650 476 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 uc_338.11-201ENST00000619132 160 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC009509.4-201ENST00000619202 509 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC093648.1-201ENST00000623546 606 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC009161.2-201ENST00000624626 138 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 SNORA23-201ENST00000365128 182 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MIR17-201ENST00000385012 84 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 ELOCP14-201ENST00000428070 331 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 ELOCP7-201ENST00000439968 331 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MTCO1P19-201ENST00000443487 500 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RPL30P5-201ENST00000494923 336 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC105252.1-201ENST00000503089 286 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC104806.1-201ENST00000508720 308 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MTCO3P7-201ENST00000510008 774 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RNU5F-8P-201ENST00000515941 111 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RNU6-927P-201ENST00000516199 100 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC022634.1-201ENST00000520765 532 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 DPPA3P3-201ENST00000603842 430 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AL022154.1-201ENST00000604698 785 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC022893.3-201ENST00000607665 437 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 FRG1KP-201ENST00000623592 341 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.178-201ENST00000363832 102 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RNU6-884P-201ENST00000363889 107 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 SNORA20.2-201ENST00000383922 131 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RNU6-517P-201ENST00000384362 110 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 CISD1P1-201ENST00000393907 327 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AL663109.1-201ENST00000411498 844 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 NDUFB4P7-201ENST00000423198 363 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RPS15AP5-201ENST00000436276 388 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MTND4P32-201ENST00000437189 1237 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RPS15AP9-201ENST00000439856 381 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC244505.5-201ENST00000443639 207 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MTND1P29-201ENST00000448112 647 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 SNORA31.3-201ENST00000516029 96 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 RNU6-572P-201ENST00000516724 80 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AP005660.1-201ENST00000522972 293 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC093012.1-202ENST00000549403 582 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC012213.3-201ENST00000577199 777 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 MIR3611-201ENST00000584484 83 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC112191.3-201ENST00000604371 277 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 AC080078.3-201ENST00000605407 463 ntBASIC1.54□□□□□ -2.16
SHROOM3Q8TF72 CR848007.1-201ENST00000442354 1699 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.367-201ENST00000365544 101 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 RNU6-259P-201ENST00000383999 107 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 RNU6-1035P-201ENST00000384477 107 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 BTF3L4P3-201ENST00000418879 476 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AL109913.1-201ENST00000421173 514 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 HMGB1P9-201ENST00000429856 646 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 MTCO2P11-201ENST00000431069 680 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 RPS15AP27-201ENST00000449183 343 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 MTCO2P29-201ENST00000465212 189 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AC117522.1-201ENST00000509821 380 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 RNU6-581P-201ENST00000516214 105 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 RNA5SP337-201ENST00000517007 109 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AP002963.1-201ENST00000530590 184 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms