Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC023934.1-201ENST00000574529 2389 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 RNU6-546P-201ENST00000383991 107 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNY3P5-201ENST00000384127 102 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MIR942-201ENST00000401111 86 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC069257.2-201ENST00000441819 155 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNU6-1092P-201ENST00000516955 87 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP291-201ENST00000517222 105 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL158163.2-201ENST00000619110 700 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC138627.2-201ENST00000624202 601 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AP003400.6-201ENST00000624698 740 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL391994.1-201ENST00000254724 282 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.124-201ENST00000363339 93 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RPL22P18-201ENST00000417197 377 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL392003.1-201ENST00000434394 243 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC002381.1-201ENST00000447049 280 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 OR6C5P-201ENST00000452388 923 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP134-201ENST00000516492 96 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC090142.3-201ENST00000519012 385 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC073410.2-201ENST00000603240 332 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.804-201ENST00000615262 101 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MTND4P14-201ENST00000435799 1354 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNU6-793P-201ENST00000384233 104 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MIR135A2-201ENST00000384854 100 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MIR200A-201ENST00000384875 90 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNU1-119P-201ENST00000391122 165 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 CETN4P-201ENST00000432407 469 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC132479.1-201ENST00000449160 144 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 CYCSP27-201ENST00000527643 293 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL136520.1-202ENST00000555494 763 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC107304.1-201ENST00000604229 296 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 BX284668.6-201ENST00000606899 438 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 uc_338.6-201ENST00000613544 171 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP100-201ENST00000410903 110 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP59-201ENST00000410922 110 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 PNRC2P1-201ENST00000423940 420 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC099677.2-201ENST00000436385 175 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC112771.1-201ENST00000463581 102 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP255-201ENST00000516370 107 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RN7SKP88-201ENST00000516847 250 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNU6-889P-201ENST00000517189 103 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC016256.1-201ENST00000547971 354 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC009712.1-201ENST00000564938 316 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 AC105129.3-201ENST00000605455 485 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 7SK.8-201ENST00000612110 250 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 7SK.11-201ENST00000615477 250 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 MIR8063-201ENST00000621930 81 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 7SK.13-201ENST00000622040 250 ntBASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.05□□□□□ -2.4
ALMS1Q8TCU4 RNU6-741P-201ENST00000383889 107 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 ISCA1P1-201ENST00000426679 387 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 MTND1P33-201ENST00000446251 917 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 snoU13.21-201ENST00000459368 105 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AL160314.1-201ENST00000490836 438 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 SNORD116-30-201ENST00000516468 85 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 EIF1P4-201ENST00000572664 335 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC098614.4-201ENST00000607601 462 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC135803.1-201ENST00000608748 565 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.100-201ENST00000363141 102 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.559-201ENST00000384686 107 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.583-201ENST00000391033 113 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP451-201ENST00000410588 110 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 YWHAZP8-201ENST00000436935 731 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC015724.1-201ENST00000478577 156 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC022483.1-201ENST00000514020 567 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 SMURF2P1-201ENST00000514992 481 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 SNORA31.4-201ENST00000516049 129 ntBASIC0.04□□□□□ -2.4
ALMS1Q8TCU4 AC124293.1-201ENST00000530034 493 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms