Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC073308.1-201ENST00000623696 305 ntBASIC3.56□□□□□ -1.84
HIPK4Q8NE63 SCARNA4-201ENST00000629045 128 ntBASIC3.56□□□□□ -1.84
HIPK4Q8NE63 AC243829.7-201ENST00000633081 225 ntBASIC3.56□□□□□ -1.84
HIPK4Q8NE63 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HIPK4Q8NE63 AC110491.1-201ENST00000562191 2010 ntBASIC3.56□□□□□ -1.84
HIPK4Q8NE63 AF117829.1-206ENST00000621883 3802 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC233263.6-201ENST00000631132 1963 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC126755.2-208ENST00000327792 462 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC138969.1-213ENST00000331436 462 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 SNORD56.1-201ENST00000362913 68 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RNA5SP515-201ENST00000364570 118 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RNU4-9P-201ENST00000364951 139 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RNU6-968P-201ENST00000384076 107 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.471-201ENST00000384312 102 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RNU6-713P-201ENST00000384761 107 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RNU6-130P-201ENST00000411112 103 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RN7SKP53-201ENST00000411337 315 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RPL23AP95-201ENST00000426806 265 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC005300.1-201ENST00000428401 373 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RPL23AP22-201ENST00000437556 453 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 SSXP4-201ENST00000451349 245 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 U8.22-201ENST00000459141 133 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RN7SL385P-201ENST00000468873 276 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RPL30P1-201ENST00000488676 339 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RPL23AP75-201ENST00000491601 451 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC097462.2-201ENST00000504623 481 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.706-201ENST00000516933 99 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC022695.1-201ENST00000522089 237 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 IGHV3-76-201ENST00000522465 295 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 TGIF1P1-201ENST00000558095 802 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC021739.1-201ENST00000559631 174 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 HMGN2P15-201ENST00000585707 270 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 RPL23AP88-201ENST00000605759 454 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC062037.2-201ENST00000610137 73 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AC024581.2-201ENST00000619986 252 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
HIPK4Q8NE63 SNORA43.4-201ENST00000629559 138 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 AL136164.4-201ENST00000625013 2135 ntBASIC3.55□□□□□ -1.84
HIPK4Q8NE63 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.27-201ENST00000362540 103 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.64-201ENST00000362845 102 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RNU6-770P-201ENST00000363929 105 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.307-201ENST00000365022 117 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RNU1-140P-201ENST00000365040 165 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RNU6-1280P-201ENST00000365211 107 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RNU6-1286P-201ENST00000383871 107 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 MT-TW-201ENST00000387382 68 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RPL21P75-201ENST00000396599 483 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RPL21P28-201ENST00000401418 483 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL590556.1-201ENST00000423231 483 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 HMGN2P20-201ENST00000437531 273 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL590664.1-201ENST00000448065 339 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 snoU13.30-201ENST00000458951 104 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RPL21P39-201ENST00000463605 483 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 TOMM22P6-201ENST00000465035 409 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RPS4XP22-201ENST00000480755 780 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC087190.1-201ENST00000484462 480 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC107032.1-201ENST00000485945 480 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC132942.1-201ENST00000486753 483 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC093591.1-201ENST00000491435 481 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RPL21P16-201ENST00000495531 483 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC110768.1-201ENST00000509222 400 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RNU6-408P-201ENST00000515910 100 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 SNORA31.23-201ENST00000517219 133 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC006199.1-201ENST00000548728 219 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL442163.3-201ENST00000554110 156 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 MIR3668-201ENST00000582138 75 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC019159.1-201ENST00000605094 187 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC092628.2-201ENST00000622492 339 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 AC112484.5-201ENST00000624189 228 ntBASIC3.54□□□□□ -1.84
HIPK4Q8NE63 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 1005.5 ms