Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AP004607.1-201ENST00000524456 203 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AF235103.2-201ENST00000525753 346 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AP000763.2-201ENST00000540641 163 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AC079600.2-201ENST00000550076 130 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.59□□□□□ -1.99
CPSF7Q8N684 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.59□□□□□ -1.99
CPSF7Q8N684 MIR4801-201ENST00000582704 82 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AC060780.3-201ENST00000589464 80 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 BNIP3P25-201ENST00000596023 559 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -1.99
CPSF7Q8N684 AL121757.2-201ENST00000611223 313 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CPSF7Q8N684 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 AC006504.8-201ENST00000621046 635 ntBASIC2.59□□□□□ -1.99
CPSF7Q8N684 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.59□□□□□ -2
CPSF7Q8N684 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CPSF7Q8N684 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-858P-201ENST00000362436 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-37P-201ENST00000362692 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-11P-201ENST00000364234 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-25P-201ENST00000383873 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-1-201ENST00000383898 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-48P-201ENST00000384161 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-36P-201ENST00000384172 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-4P-201ENST00000384205 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-5P-201ENST00000384238 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-3P-201ENST00000384314 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-16P-201ENST00000384385 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-15P-201ENST00000384534 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-2-201ENST00000384627 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-29P-201ENST00000384637 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-19P-201ENST00000384718 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-9-201ENST00000384776 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-33P-201ENST00000384793 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
CPSF7Q8N684 EIF4E2P1-201ENST00000393781 255 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC009161.1-201ENST00000417306 376 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RPL30P16-201ENST00000419341 429 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 PTGES3P4-201ENST00000426243 356 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AL358075.3-201ENST00000426289 226 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC063976.3-201ENST00000426849 329 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC117503.1-201ENST00000472241 394 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
CPSF7Q8N684 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.58□□□□□ -2
CPSF7Q8N684 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 ACA59.2-201ENST00000517061 156 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.58□□□□□ -2
CPSF7Q8N684 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC008121.1-201ENST00000603244 268 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC091152.3-201ENST00000604227 325 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 APOOP1-201ENST00000604695 592 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC019159.1-201ENST00000605094 187 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 RNU6-6P-201ENST00000606623 107 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AL357078.3-201ENST00000607528 618 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.58□□□□□ -2
CPSF7Q8N684 AC010378.1-201ENST00000619270 362 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.58□□□□□ -2
CPSF7Q8N684 AC090617.10-201ENST00000624308 134 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 Z69720.2-201ENST00000624755 279 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 IGHVIII-44-202ENST00000636235 289 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 AC121333.1-201ENST00000567488 2709 ntBASIC2.58□□□□□ -2
CPSF7Q8N684 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
CPSF7Q8N684 AC099654.7-201ENST00000635788 2127 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 RNU4-82P-201ENST00000362443 140 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CPSF7Q8N684 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AL162578.1-201ENST00000406202 378 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 FTH1P15-201ENST00000406984 280 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.57□□□□□ -2
CPSF7Q8N684 HMGB1P31-201ENST00000437242 427 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.57□□□□□ -2
CPSF7Q8N684 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.57□□□□□ -2
CPSF7Q8N684 AC006026.2-201ENST00000457376 180 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 MRPL42P6-201ENST00000486397 371 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
CPSF7Q8N684 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 RNU6-323P-201ENST00000521915 107 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AC023050.3-201ENST00000541142 333 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.57□□□□□ -2
CPSF7Q8N684 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.57□□□□□ -2
CPSF7Q8N684 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.57□□□□□ -2
CPSF7Q8N684 BNIP3P10-201ENST00000605360 577 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AC123912.5-201ENST00000605470 343 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 RNU6-85P-201ENST00000605989 107 ntBASIC2.57□□□□□ -2
CPSF7Q8N684 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
CPSF7Q8N684 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.56□□□□□ -2
CPSF7Q8N684 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.56□□□□□ -2
CPSF7Q8N684 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
CPSF7Q8N684 RNU6-942P-201ENST00000363002 107 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 Y_RNA.86-201ENST00000363020 111 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 Y_RNA.100-201ENST00000363141 102 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 U3.12-201ENST00000364498 214 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RNU5E-7P-201ENST00000365290 117 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RNU6-1283P-201ENST00000365314 105 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
CPSF7Q8N684 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms