Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SNORD56.1-201ENST00000362913 68 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 U8.2-201ENST00000363156 134 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-1274P-201ENST00000384557 107 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-297P-201ENST00000384636 107 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RNU2-23P-201ENST00000410545 195 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RN7SKP223-201ENST00000410582 62 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 OR6C66P-201ENST00000414917 930 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 TOMM20P4-201ENST00000427861 435 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RPL31P35-201ENST00000431058 377 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AL033528.1-201ENST00000453780 140 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 snoU109.1-201ENST00000459339 135 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AP005639.2-201ENST00000527592 928 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 NDUFA5P6-201ENST00000542110 379 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 Z99289.3-201ENST00000605586 594 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AP001506.1-201ENST00000615444 211 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RMST_4.1-201ENST00000616886 107 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 AL603755.1-201ENST00000619504 163 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 RMST_7.1-201ENST00000621935 268 ntBASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NUDCD3Q8IVD9 MTND5P17-201ENST00000418405 1603 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 SNORA62.1-201ENST00000364287 154 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 SNORA26.8-201ENST00000391306 124 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 RAP1BP3-201ENST00000407180 549 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 RNA5SP390-201ENST00000410191 113 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 SNORD56-201ENST00000413522 71 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 DNAJC19P4-201ENST00000440115 345 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 RPL30P12-201ENST00000474666 353 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 RPL21P99-201ENST00000480369 423 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 HMGB1P35-201ENST00000503360 598 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AC107393.1-201ENST00000512403 346 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-667P-201ENST00000517186 102 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AP002453.2-201ENST00000533503 320 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AC137800.2-201ENST00000574375 120 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 MIR4513-201ENST00000581077 86 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AC243960.4-201ENST00000600532 288 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 CLIC4P2-201ENST00000601934 717 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 MIR98-201ENST00000606724 119 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AL773524.1-201ENST00000614065 229 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AC005296.1-201ENST00000616145 209 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 AC011155.2-201ENST00000623202 216 ntBASIC1.78□□□□□ -2.12
NUDCD3Q8IVD9 FARSBP1-201ENST00000435808 1778 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-78P-201ENST00000362897 107 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1210P-201ENST00000363775 107 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-74P-201ENST00000384235 107 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-550P-201ENST00000391057 101 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RNU2-3P-201ENST00000410144 191 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RN7SKP192-201ENST00000411291 327 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 MTND3P17-201ENST00000416968 344 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 MTND2P18-201ENST00000419962 1030 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 GPR143P-201ENST00000434155 205 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 MTND2P4-201ENST00000445034 1004 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC079781.2-201ENST00000446424 169 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 SNRPGP9-201ENST00000456025 225 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AL162395.1-201ENST00000457882 422 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 RPL23AP94-201ENST00000512518 302 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 Y_RNA.717-201ENST00000517106 92 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AP003392.2-201ENST00000527269 208 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC091544.4-201ENST00000555268 342 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC012414.6-201ENST00000568241 401 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 Z82243.1-201ENST00000609432 473 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 U6.114-201ENST00000636407 96 ntBASIC1.77□□□□□ -2.13
NUDCD3Q8IVD9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 Y_RNA.169-201ENST00000363745 96 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms