Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC006157.1-201ENST00000611750 366 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AC083806.3-201ENST00000614016 455 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 HMGB1P24-202ENST00000615653 685 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 ADAM3A-203ENST00000461344 2157 ntBASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCHD4Q6ZW05 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC099654.7-201ENST00000635788 2127 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-1280P-201ENST00000365211 107 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 DYNLT3P1-201ENST00000378574 347 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 Y_RNA.428-201ENST00000384078 102 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 RNY1P14-201ENST00000384426 108 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 SNORD116-20-201ENST00000384529 92 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 Y_RNA.533-201ENST00000384596 114 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 FTH1P15-201ENST00000406984 280 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 RNA5SP44-201ENST00000410446 133 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 MRPS18CP6-201ENST00000423587 223 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC008267.5-201ENST00000424928 265 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 RPS29P27-201ENST00000463711 170 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC114801.2-201ENST00000503825 781 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 SNORD116.3-201ENST00000517176 78 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC010653.1-201ENST00000571108 881 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AL158827.2-201ENST00000602494 330 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AC005014.2-201ENST00000607795 599 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 AL691447.3-201ENST00000635020 330 ntBASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PTCHD4Q6ZW05 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-858P-201ENST00000362436 107 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RNA5SP124-201ENST00000362739 110 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RNA5SP479-201ENST00000364858 117 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-198P-201ENST00000384258 104 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AL714022.1-201ENST00000439897 151 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 GSTA11P-201ENST00000452866 669 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 SNORD105B-201ENST00000458770 79 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 MRPL42P6-201ENST00000486397 371 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RPL17P19-201ENST00000489069 552 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AC116655.1-201ENST00000508324 901 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RAC1P5-201ENST00000512182 576 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 MIR4697-201ENST00000582977 78 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 RPL23AP78-201ENST00000599928 470 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AC091925.1-201ENST00000623204 462 ntBASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PTCHD4Q6ZW05 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 MTND5P9-201ENST00000503854 1755 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 MTND5P27-201ENST00000428871 1720 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-227P-201ENST00000362865 103 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNY1P16-201ENST00000363063 111 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNA5SP197-201ENST00000363357 119 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-1032P-201ENST00000384100 107 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RN7SKP220-201ENST00000410611 288 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 CYCSP19-201ENST00000411715 316 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 NUP35P1-201ENST00000422734 947 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 EIF4EP2-201ENST00000422816 654 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 CYCSP4-201ENST00000429682 331 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AL591043.1-201ENST00000432461 424 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 CST9LP2-201ENST00000437612 320 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AC105758.1-201ENST00000506038 399 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AC104619.4-201ENST00000510773 249 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RN7SKP18-201ENST00000516005 275 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-1137P-201ENST00000517073 99 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms