Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC092794.2-201ENST00000620933 563 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AC110079.1-202ENST00000635213 138 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.92
SYNE3Q6ZMZ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SYNE3Q6ZMZ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 RNU1-105P-201ENST00000363470 161 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 SNORA72.1-201ENST00000363485 129 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-128P-201ENST00000383976 107 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 MIR592-201ENST00000384959 97 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-510P-201ENST00000391239 108 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AL356057.3-201ENST00000402607 340 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 RNU2-25P-201ENST00000411041 191 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 SNORD56-201ENST00000413522 71 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 PGBD4P6-201ENST00000421501 610 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC063976.3-201ENST00000426849 329 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 IFNA20P-201ENST00000436840 528 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC098614.3-201ENST00000438957 440 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AL359672.1-201ENST00000442302 409 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-329P-201ENST00000459618 107 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AP005597.4-201ENST00000526762 229 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC011712.1-201ENST00000588959 234 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC023043.2-201ENST00000589678 1026 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AL391813.1-201ENST00000603098 260 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 AC091152.3-201ENST00000604227 325 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 MIR3199-2-201ENST00000636243 86 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.08□□□□□ -1.92
SYNE3Q6ZMZ3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 ADAM3A-203ENST00000461344 2157 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-845P-201ENST00000362578 103 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 SNORA5B-201ENST00000363786 132 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-767P-201ENST00000384132 107 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AL122016.1-201ENST00000403365 367 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AL117339.3-201ENST00000418733 162 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AL161651.1-201ENST00000440882 223 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 MTND4P18-201ENST00000447010 465 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 RPS27P26-201ENST00000494583 239 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 HMGN1P12-201ENST00000499125 195 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AC025465.4-201ENST00000513422 638 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AL022345.1-201ENST00000607292 135 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AL138726.1-201ENST00000614873 333 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AC092608.2-201ENST00000624427 218 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 U4.7-201ENST00000638126 106 ntBASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE3Q6ZMZ3 AC010889.1-201ENST00000566193 2666 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-78P-201ENST00000362897 107 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RN7SKP32-201ENST00000410167 303 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RNU2-49P-201ENST00000410666 184 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 MTND3P8-201ENST00000412909 339 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 TOMM20P4-201ENST00000427861 435 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 ARL5AP4-201ENST00000430731 512 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AC011816.1-201ENST00000441346 546 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RPL7P12-201ENST00000446719 750 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RPL23AP45-201ENST00000476406 468 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RPL7P43-201ENST00000478876 753 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AC116655.1-201ENST00000508324 901 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 TBCAP3-201ENST00000512475 312 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 RNU6-256P-201ENST00000516747 97 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AC109479.2-201ENST00000517842 174 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 CR383656.8-201ENST00000549046 145 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AL121821.2-201ENST00000556081 394 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 MIR4742-201ENST00000581069 85 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 MIR3942-201ENST00000585264 109 ntBASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SYNE3Q6ZMZ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 CBX3P1-201ENST00000325243 554 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.05□□□□□ -1.92
SYNE3Q6ZMZ3 SNORD62.1-201ENST00000362541 86 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms