Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RNU6-522P-201ENST00000364497 107 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RNU6-19P-201ENST00000384718 107 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RNU6-482P-201ENST00000391068 107 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RNU6-373P-201ENST00000411247 98 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 NDUFB1P2-201ENST00000449477 176 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 FGF7P6-202ENST00000451282 293 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC133134.1-201ENST00000466800 359 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 MRPL42P6-201ENST00000486397 371 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RN7SL20P-201ENST00000488827 297 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RN7SL633P-201ENST00000488974 297 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC091885.1-201ENST00000506658 268 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AP002770.2-201ENST00000543613 532 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 APOOP1-201ENST00000604695 592 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 RBM11P1-201ENST00000604951 799 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AL590808.1-201ENST00000618696 141 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC010378.1-201ENST00000619270 362 ntBASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 AC009487.2-201ENST00000420969 6821 ntBASIC2.46□□□□□ -2.01
PDLIM3Q53GG5 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC073325.2-201ENST00000339545 159 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC062016.1-201ENST00000355719 319 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 Y_RNA.160-201ENST00000363677 92 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 Y_RNA.480-201ENST00000384364 102 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 SNORD116-20-201ENST00000384529 92 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 RNU6-750P-201ENST00000390946 107 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 ARL5AP1-201ENST00000418991 388 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC022018.1-201ENST00000430685 241 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 snoU13.15-201ENST00000459407 104 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC007547.1-201ENST00000462177 490 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC107626.1-201ENST00000471084 183 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AP004217.1-201ENST00000480579 346 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 RPS29P25-201ENST00000481709 171 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC008885.1-201ENST00000514930 301 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 RNU6-1332P-201ENST00000516666 104 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC104576.1-201ENST00000524225 88 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC007151.1-201ENST00000572774 483 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 MIR3941-201ENST00000582572 103 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 MIR4801-201ENST00000582704 82 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC091152.3-201ENST00000604227 325 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 RMST_4.1-201ENST00000616886 107 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AL449363.1-201ENST00000617815 186 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC103705.1-201ENST00000619013 241 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 Z82195.2-201ENST00000612348 18351 ntBASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PDLIM3Q53GG5 AC010329.5-201ENST00000623497 2174 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 SNORD15B-201ENST00000384714 146 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 MIR450B-201ENST00000401182 78 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AL356776.1-201ENST00000406574 447 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC096649.2-201ENST00000416186 393 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC009161.1-201ENST00000417306 376 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 PTGES3P4-201ENST00000426243 356 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 OSTCP8-201ENST00000445117 448 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC104389.3-201ENST00000445629 235 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 IFNA11P-201ENST00000446352 526 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AL109933.2-201ENST00000452651 260 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 RPL31P58-201ENST00000469001 379 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 RPL23AP45-201ENST00000476406 468 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 RPL23AP49-201ENST00000492925 468 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 RNU6-358P-201ENST00000516564 75 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 RNU6-548P-201ENST00000517083 115 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 RNU6-1314P-201ENST00000517139 104 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC009812.2-201ENST00000517657 457 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC069113.1-201ENST00000517763 267 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AP004607.1-201ENST00000524456 203 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AF235103.2-201ENST00000525753 346 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 792.6 ms