Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RSL24D1P11-201ENST00000591045 491 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 BNIP3P30-201ENST00000601184 574 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AL713866.2-201ENST00000603579 219 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC025449.1-201ENST00000603896 529 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX4Q33E94 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 Y_RNA.783-201ENST00000613546 102 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 U4atac.1-201ENST00000618345 95 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC009161.2-201ENST00000624626 138 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RFX4Q33E94 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RFX4Q33E94 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU6-1287P-201ENST00000362914 107 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 Y_RNA.77-201ENST00000362962 107 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU6-715P-201ENST00000365204 103 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 Y_RNA.359-201ENST00000365498 102 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU4-48P-201ENST00000365559 182 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU6-45P-201ENST00000384471 107 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 SNORD116-20-201ENST00000384529 92 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU6-1060P-201ENST00000384664 107 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNY3P9-201ENST00000384727 106 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU2-9P-201ENST00000410194 145 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU6-607P-201ENST00000411283 108 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 AL596276.1-201ENST00000434465 418 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.78□□□□□ -2.12
RFX4Q33E94 TPT1P7-201ENST00000458300 517 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RNU7-182P-201ENST00000459009 62 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 MTAPP1-201ENST00000489154 819 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC140059.1-201ENST00000489238 361 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 HMGB1P30-201ENST00000492455 606 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 RPL22P13-201ENST00000493291 347 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC010424.1-201ENST00000506336 297 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 SNORA43.2-201ENST00000516652 128 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 CR383656.8-201ENST00000549046 145 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 SUB1P2-201ENST00000556401 297 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.78□□□□□ -2.12
RFX4Q33E94 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 MIR4703-201ENST00000577728 79 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 AC078899.2-201ENST00000595282 212 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC010620.1-201ENST00000601088 1102 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AL138963.2-201ENST00000605137 226 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC021646.1-201ENST00000605469 484 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC093788.1-201ENST00000609356 927 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC109347.2-201ENST00000610220 349 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 AL590808.1-201ENST00000618696 141 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
RFX4Q33E94 RMST_7.1-201ENST00000621935 268 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 U6.114-201ENST00000636407 96 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 MIR219B-201ENST00000637023 88 ntBASIC1.78□□□□□ -2.12
RFX4Q33E94 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.77□□□□□ -2.13
RFX4Q33E94 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
RFX4Q33E94 AL390237.1-201ENST00000404226 1415 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX4Q33E94 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RFX4Q33E94 RNU6-622P-201ENST00000384272 103 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AC068050.1-201ENST00000394891 380 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 RN7SKP32-201ENST00000410167 303 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 RNA5SP425-201ENST00000410336 112 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX4Q33E94 Z98742.3-201ENST00000418637 326 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RFX4Q33E94 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.77□□□□□ -2.13
RFX4Q33E94 MTND1P18-201ENST00000448191 573 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 PMCHL2-203ENST00000457791 237 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.77□□□□□ -2.13
RFX4Q33E94 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.77□□□□□ -2.13
RFX4Q33E94 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX4Q33E94 AC079140.3-201ENST00000511111 550 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 RNA5SP503-201ENST00000517047 117 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AP005435.4-201ENST00000529514 284 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AP002963.1-201ENST00000530590 184 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AP000889.1-201ENST00000530968 660 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX4Q33E94 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.77□□□□□ -2.13
RFX4Q33E94 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX4Q33E94 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AC006362.1-201ENST00000567392 174 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 MIR4529-201ENST00000578110 78 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 MIR5692A1-201ENST00000580523 69 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.77□□□□□ -2.13
RFX4Q33E94 NDUFA8P1-201ENST00000605525 367 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AC072046.2-201ENST00000618366 268 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
RFX4Q33E94 AC064859.1-201ENST00000624741 174 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 SCARNA4-202ENST00000625402 129 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms