Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ELOCP7-201ENST00000439968 331 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.05□□□□□ -2.4
HSPG2P98160 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.05□□□□□ -2.4
HSPG2P98160 AC025465.4-201ENST00000513422 638 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 SNORD116-28-201ENST00000516123 91 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RN7SKP12-201ENST00000516275 143 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-1092P-201ENST00000516955 87 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 HIGD1AP6-201ENST00000521833 279 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.05□□□□□ -2.4
HSPG2P98160 AC136619.2-201ENST00000563361 631 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 HMGB1P51-201ENST00000605166 638 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AL355802.4-201ENST00000607635 548 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 FTX_3.1-201ENST00000610451 147 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC011939.3-201ENST00000613686 466 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 uc_338.17-201ENST00000619633 179 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-1065P-201ENST00000384513 106 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-1184P-201ENST00000384588 108 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 SNORD12-201ENST00000391002 90 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RNU2-49P-201ENST00000410666 184 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AL392003.1-201ENST00000434394 243 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.05□□□□□ -2.4
HSPG2P98160 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
HSPG2P98160 AC022483.1-201ENST00000514020 567 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-202P-201ENST00000515998 96 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-197P-201ENST00000516680 100 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.05□□□□□ -2.4
HSPG2P98160 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.05□□□□□ -2.4
HSPG2P98160 BNIP3P27-201ENST00000599991 412 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 MTND4P14-201ENST00000435799 1354 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.05□□□□□ -2.4
HSPG2P98160 Y_RNA.568-201ENST00000384742 113 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 MIR514A1-201ENST00000385133 98 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 MIR942-201ENST00000401111 86 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC127391.1-201ENST00000411737 98 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.05□□□□□ -2.4
HSPG2P98160 MTND1P33-201ENST00000446251 917 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
HSPG2P98160 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.05□□□□□ -2.4
HSPG2P98160 RAP1BP2-201ENST00000478270 544 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.05□□□□□ -2.4
HSPG2P98160 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.05□□□□□ -2.4
HSPG2P98160 AC124293.1-201ENST00000530034 493 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC022616.8-201ENST00000533569 253 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.05□□□□□ -2.4
HSPG2P98160 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.05□□□□□ -2.4
HSPG2P98160 AC026271.5-201ENST00000577873 130 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC105129.3-201ENST00000605455 485 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 AC007490.1-201ENST00000624321 703 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
HSPG2P98160 SNORD114-28-201ENST00000363610 72 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 SNORD1A-201ENST00000364968 72 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RNU6-31P-201ENST00000384388 108 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RNU6-1151P-201ENST00000384684 107 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.04□□□□□ -2.4
HSPG2P98160 NANOGP2-201ENST00000435391 727 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.04□□□□□ -2.4
HSPG2P98160 AC069257.2-201ENST00000441819 155 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.04□□□□□ -2.4
HSPG2P98160 AP1S2P1-201ENST00000457344 379 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AC105758.1-201ENST00000506038 399 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RNU6-27P-201ENST00000516146 107 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.04□□□□□ -2.4
HSPG2P98160 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
HSPG2P98160 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.04□□□□□ -2.4
HSPG2P98160 AC002400.1-201ENST00000569310 726 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AL031176.1-201ENST00000604554 466 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AP003400.6-201ENST00000624698 740 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 U2.21-201ENST00000637295 81 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HSPG2P98160 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
HSPG2P98160 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HSPG2P98160 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HSPG2P98160 RPL22P22-201ENST00000395439 379 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 YWHAZP8-201ENST00000436935 731 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 HSPE1P9-201ENST00000440046 311 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.04□□□□□ -2.4
HSPG2P98160 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.04□□□□□ -2.4
HSPG2P98160 AC090142.3-201ENST00000519012 385 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.04□□□□□ -2.4
HSPG2P98160 AC022432.1-201ENST00000595739 310 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.04□□□□□ -2.4
HSPG2P98160 AC091152.3-201ENST00000604227 325 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AL121652.1-201ENST00000608851 448 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 Z82243.1-201ENST00000609432 473 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AC090116.1-201ENST00000615679 446 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 AL159972.1-201ENST00000625150 448 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
HSPG2P98160 AL391994.1-201ENST00000254724 282 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 Y_RNA.203-201ENST00000364106 102 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RNU6-921P-201ENST00000384361 107 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HSPG2P98160 RNU2-48P-201ENST00000410694 191 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RNA5SP100-201ENST00000410903 110 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RNA5SP59-201ENST00000410922 110 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 RPS27P16-201ENST00000425758 201 ntBASIC0.04□□□□□ -2.4
HSPG2P98160 FO393419.3-201ENST00000428741 282 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms