Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.41□□□□□ -1.86
PER3P56645 CR383656.8-201ENST00000549046 145 ntBASIC3.41□□□□□ -1.86
PER3P56645 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
PER3P56645 MIR7851-201ENST00000610611 160 ntBASIC3.41□□□□□ -1.86
PER3P56645 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.41□□□□□ -1.86
PER3P56645 AL138880.2-201ENST00000616214 239 ntBASIC3.41□□□□□ -1.86
PER3P56645 AC068831.7-201ENST00000616954 363 ntBASIC3.41□□□□□ -1.86
PER3P56645 AC008121.3-201ENST00000618726 433 ntBASIC3.41□□□□□ -1.86
PER3P56645 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.41□□□□□ -1.86
PER3P56645 AC138305.3-201ENST00000624988 240 ntBASIC3.41□□□□□ -1.86
PER3P56645 MTND5P16-201ENST00000460269 1703 ntBASIC3.41□□□□□ -1.86
PER3P56645 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PER3P56645 AC005592.1-201ENST00000566527 1640 ntBASIC3.41□□□□□ -1.86
PER3P56645 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
PER3P56645 AL049781.1-201ENST00000623195 3585 ntBASIC3.4□□□□□ -1.86
PER3P56645 AL136164.4-201ENST00000625013 2135 ntBASIC3.4□□□□□ -1.86
PER3P56645 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PER3P56645 RNY3P11-201ENST00000364153 102 ntBASIC3.4□□□□□ -1.87
PER3P56645 RNA5SP267-201ENST00000364893 126 ntBASIC3.4□□□□□ -1.87
PER3P56645 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
PER3P56645 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PER3P56645 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
PER3P56645 MIR548F4-201ENST00000408515 105 ntBASIC3.4□□□□□ -1.87
PER3P56645 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
PER3P56645 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.4□□□□□ -1.87
PER3P56645 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
PER3P56645 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.4□□□□□ -1.87
PER3P56645 AL031659.1-201ENST00000447075 539 ntBASIC3.4□□□□□ -1.87
PER3P56645 AL353752.1-201ENST00000454946 260 ntBASIC3.4□□□□□ -1.87
PER3P56645 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.4□□□□□ -1.87
PER3P56645 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.4□□□□□ -1.87
PER3P56645 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.4□□□□□ -1.87
PER3P56645 RNU6-764P-201ENST00000516396 105 ntBASIC3.4□□□□□ -1.87
PER3P56645 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.4□□□□□ -1.87
PER3P56645 AC007991.1-201ENST00000522680 631 ntBASIC3.4□□□□□ -1.87
PER3P56645 AC023442.1-201ENST00000531247 422 ntBASIC3.4□□□□□ -1.87
PER3P56645 AC010186.2-204ENST00000537668 439 ntBASIC3.4□□□□□ -1.87
PER3P56645 AC006199.1-201ENST00000548728 219 ntBASIC3.4□□□□□ -1.87
PER3P56645 BRDTP1-201ENST00000605735 677 ntBASIC3.4□□□□□ -1.87
PER3P56645 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.4□□□□□ -1.87
PER3P56645 AL606534.2-204ENST00000635008 178 ntBASIC3.4□□□□□ -1.87
PER3P56645 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
PER3P56645 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PER3P56645 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PER3P56645 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 Y_RNA.123-201ENST00000363338 102 ntBASIC3.39□□□□□ -1.87
PER3P56645 RNU4-42P-201ENST00000364738 142 ntBASIC3.39□□□□□ -1.87
PER3P56645 Y_RNA.314-201ENST00000365114 102 ntBASIC3.39□□□□□ -1.87
PER3P56645 RNU6-1280P-201ENST00000365211 107 ntBASIC3.39□□□□□ -1.87
PER3P56645 AC074117.2-201ENST00000417130 397 ntBASIC3.39□□□□□ -1.87
PER3P56645 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.39□□□□□ -1.87
PER3P56645 AC096644.2-201ENST00000429278 159 ntBASIC3.39□□□□□ -1.87
PER3P56645 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.39□□□□□ -1.87
PER3P56645 AC007969.2-201ENST00000441891 191 ntBASIC3.39□□□□□ -1.87
PER3P56645 AC006026.2-201ENST00000457376 180 ntBASIC3.39□□□□□ -1.87
PER3P56645 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
PER3P56645 AC009812.2-201ENST00000517657 457 ntBASIC3.39□□□□□ -1.87
PER3P56645 GNAI2P1-201ENST00000541815 315 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR4513-201ENST00000581077 86 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR1244-1-201ENST00000612829 85 ntBASIC3.39□□□□□ -1.87
PER3P56645 AC087588.2-201ENST00000617667 426 ntBASIC3.39□□□□□ -1.87
PER3P56645 AF117829.1-206ENST00000621883 3802 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
PER3P56645 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.39□□□□□ -1.87
PER3P56645 MIR1244-3-201ENST00000635744 85 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR4272-201ENST00000635924 64 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR1244-2-201ENST00000636449 85 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR1244-4-202ENST00000636813 85 ntBASIC3.39□□□□□ -1.87
PER3P56645 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
PER3P56645 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 AC010680.1-201ENST00000590024 3590 ntBASIC3.39□□□□□ -1.87
PER3P56645 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PER3P56645 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
PER3P56645 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.39□□□□□ -1.87
PER3P56645 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PER3P56645 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
PER3P56645 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PER3P56645 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PER3P56645 AC008669.1-201ENST00000565823 2178 ntBASIC3.38□□□□□ -1.87
PER3P56645 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PER3P56645 RNU6-1309P-201ENST00000363305 108 ntBASIC3.38□□□□□ -1.87
PER3P56645 SNORA38.1-201ENST00000364172 131 ntBASIC3.38□□□□□ -1.87
PER3P56645 MIR199A2-201ENST00000385289 110 ntBASIC3.38□□□□□ -1.87
PER3P56645 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PER3P56645 Y_RNA.605-201ENST00000410577 105 ntBASIC3.38□□□□□ -1.87
PER3P56645 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.38□□□□□ -1.87
PER3P56645 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.38□□□□□ -1.87
PER3P56645 AC112492.4-201ENST00000456549 352 ntBASIC3.38□□□□□ -1.87
PER3P56645 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.38□□□□□ -1.87
PER3P56645 SNORA31.23-201ENST00000517219 133 ntBASIC3.38□□□□□ -1.87
PER3P56645 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.38□□□□□ -1.87
PER3P56645 AL117187.1-201ENST00000555482 181 ntBASIC3.38□□□□□ -1.87
PER3P56645 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
PER3P56645 AL078596.1-201ENST00000624856 447 ntBASIC3.38□□□□□ -1.87
PER3P56645 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PER3P56645 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms