Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.83□□□□□ -2.28
NUP98P52948 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.83□□□□□ -2.28
NUP98P52948 RAB11AP2-201ENST00000545905 639 ntBASIC0.83□□□□□ -2.28
NUP98P52948 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.83□□□□□ -2.28
NUP98P52948 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NUP98P52948 AP001981.2-201ENST00000603241 418 ntBASIC0.83□□□□□ -2.28
NUP98P52948 PCMTD1P7-201ENST00000634506 357 ntBASIC0.83□□□□□ -2.28
NUP98P52948 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NUP98P52948 RNU6-792P-201ENST00000363490 107 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-944P-201ENST00000364023 107 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-188P-201ENST00000364207 107 ntBASIC0.82□□□□□ -2.28
NUP98P52948 SNORD114-6-201ENST00000364393 72 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-622P-201ENST00000384272 103 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP98P52948 TIMM9P2-201ENST00000419324 266 ntBASIC0.82□□□□□ -2.28
NUP98P52948 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP98P52948 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.82□□□□□ -2.28
NUP98P52948 RPL9P9-202ENST00000466501 579 ntBASIC0.82□□□□□ -2.28
NUP98P52948 MTCYBP40-201ENST00000509390 1135 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP98P52948 SNORA31.3-201ENST00000516029 96 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AP003484.1-201ENST00000530974 250 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AC093012.1-202ENST00000549403 582 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AC004908.3-201ENST00000610248 625 ntBASIC0.82□□□□□ -2.28
NUP98P52948 MIR8065-201ENST00000620577 100 ntBASIC0.82□□□□□ -2.28
NUP98P52948 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.82□□□□□ -2.28
NUP98P52948 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
NUP98P52948 MIR330-201ENST00000362196 94 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNA5SP62-201ENST00000363457 110 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-354P-201ENST00000383862 107 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-701P-201ENST00000384059 107 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-610P-201ENST00000384264 107 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.82□□□□□ -2.28
NUP98P52948 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.82□□□□□ -2.28
NUP98P52948 RPL30P6-201ENST00000475925 342 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AC025465.3-201ENST00000510570 311 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-751P-201ENST00000516382 101 ntBASIC0.82□□□□□ -2.28
NUP98P52948 RNU6-965P-201ENST00000516721 96 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AC009902.1-201ENST00000519351 183 ntBASIC0.82□□□□□ -2.28
NUP98P52948 AC009269.6-201ENST00000621778 588 ntBASIC0.82□□□□□ -2.28
NUP98P52948 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
NUP98P52948 HAUS6P2-201ENST00000433254 2404 ntBASIC0.82□□□□□ -2.28
NUP98P52948 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
NUP98P52948 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.81□□□□□ -2.28
NUP98P52948 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
NUP98P52948 RNU6-942P-201ENST00000363002 107 ntBASIC0.81□□□□□ -2.28
NUP98P52948 RNA5SP257-201ENST00000363023 116 ntBASIC0.81□□□□□ -2.28
NUP98P52948 RNA5SP493-201ENST00000364115 91 ntBASIC0.81□□□□□ -2.28
NUP98P52948 RNU6-512P-201ENST00000364438 103 ntBASIC0.81□□□□□ -2.28
NUP98P52948 MIR193B-201ENST00000384907 83 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AC104651.1-201ENST00000427559 735 ntBASIC0.81□□□□□ -2.28
NUP98P52948 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.81□□□□□ -2.28
NUP98P52948 HMGN1P33-201ENST00000432945 451 ntBASIC0.81□□□□□ -2.28
NUP98P52948 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.81□□□□□ -2.28
NUP98P52948 AC099513.1-201ENST00000490423 301 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AC098862.1-201ENST00000504991 413 ntBASIC0.81□□□□□ -2.28
NUP98P52948 RNU6-229P-201ENST00000516614 102 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AP000763.2-201ENST00000540641 163 ntBASIC0.81□□□□□ -2.28
NUP98P52948 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.81□□□□□ -2.28
NUP98P52948 AL133153.1-201ENST00000557756 303 ntBASIC0.81□□□□□ -2.28
NUP98P52948 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AC060771.1-201ENST00000582031 164 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AC073544.2-201ENST00000601155 540 ntBASIC0.81□□□□□ -2.28
NUP98P52948 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AC013470.4-201ENST00000619978 986 ntBASIC0.81□□□□□ -2.28
NUP98P52948 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.81□□□□□ -2.28
NUP98P52948 AP003485.1-201ENST00000625093 753 ntBASIC0.81□□□□□ -2.28
NUP98P52948 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.81□□□□□ -2.28
NUP98P52948 ZNF29P-201ENST00000225587 168 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNU6-1284P-201ENST00000363701 100 ntBASIC0.8□□□□□ -2.28
NUP98P52948 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNU2-23P-201ENST00000410545 195 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RN7SKP61-201ENST00000410642 295 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNU2-7P-201ENST00000410794 178 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC009518.2-201ENST00000418056 731 ntBASIC0.8□□□□□ -2.28
NUP98P52948 MRPL35P3-201ENST00000421557 364 ntBASIC0.8□□□□□ -2.28
NUP98P52948 ZNF886P-201ENST00000450781 723 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
NUP98P52948 HMGN1P13-201ENST00000505795 138 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.8□□□□□ -2.28
NUP98P52948 AC104417.1-201ENST00000523974 751 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNU6-236P-201ENST00000363886 106 ntBASIC0.8□□□□□ -2.28
NUP98P52948 Y_RNA.251-201ENST00000364551 99 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNU6-166P-201ENST00000384371 107 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
NUP98P52948 RAC1P6-201ENST00000423911 575 ntBASIC0.8□□□□□ -2.28
NUP98P52948 FTH1P12-201ENST00000432137 551 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC092628.1-201ENST00000436250 252 ntBASIC0.8□□□□□ -2.28
NUP98P52948 USP9YP17-201ENST00000444617 696 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AL035666.1-201ENST00000446195 348 ntBASIC0.8□□□□□ -2.28
NUP98P52948 DUXAP8-207ENST00000456786 622 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.8□□□□□ -2.28
NUP98P52948 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.8□□□□□ -2.28
NUP98P52948 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.8□□□□□ -2.28
NUP98P52948 CYCSP23-201ENST00000519781 313 ntBASIC0.8□□□□□ -2.28
NUP98P52948 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
NUP98P52948 AC092451.2-201ENST00000538746 658 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
NUP98P52948 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms