Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MIR1-2-201ENST00000384961 85 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 MIR301A-201ENST00000385261 86 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 SNORA67.5-201ENST00000391036 107 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 Y_RNA.595-201ENST00000410403 105 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 RPL23AP36-201ENST00000413895 458 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 CDK8P2-201ENST00000415020 547 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 PIGFP2-201ENST00000421400 651 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 CALM2P2-201ENST00000428512 440 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXA9P31269 MTND4P32-201ENST00000437189 1237 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.91□□□□□ -2.1
HOXA9P31269 RN7SKP210-201ENST00000459176 261 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC116562.3-201ENST00000506136 177 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AC108729.3-201ENST00000513484 108 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 RNU6-572P-201ENST00000516724 80 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 RNU6-445P-201ENST00000516949 107 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
HOXA9P31269 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.91□□□□□ -2.1
HOXA9P31269 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC068587.5-201ENST00000528506 175 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 NACAP3-201ENST00000552100 481 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 OR11H5P-201ENST00000554039 926 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AL157871.3-201ENST00000557231 293 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC098848.2-201ENST00000588023 330 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 AC005296.1-201ENST00000616145 209 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC010889.1-201ENST00000566193 2666 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXA9P31269 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HOXA9P31269 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
HOXA9P31269 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HOXA9P31269 RNU6-108P-201ENST00000365558 107 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 RNU1-148P-201ENST00000384472 162 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 Y_RNA.576-201ENST00000384781 102 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 MIR518D-201ENST00000385014 87 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HOXA9P31269 SNORA40C-201ENST00000391285 128 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 CISD1P1-201ENST00000393907 327 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 RNU6-1025P-201ENST00000410629 104 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA9P31269 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA9P31269 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA9P31269 AL358453.1-201ENST00000422522 250 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL160275.3-201ENST00000423876 471 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL358934.1-201ENST00000432346 324 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXA9P31269 GPR143P-201ENST00000434155 205 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXA9P31269 MTND1P29-201ENST00000448112 647 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AC132479.1-201ENST00000449160 144 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXA9P31269 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA9P31269 TPT1P7-201ENST00000458300 517 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 RNU6-430P-201ENST00000517078 107 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 SNORA31.19-201ENST00000517079 126 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 MTCO2P4-201ENST00000517968 247 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA9P31269 AC006199.1-201ENST00000548728 219 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXA9P31269 ADI1P3-201ENST00000549509 470 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AC007151.1-201ENST00000572774 483 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXA9P31269 DEFB131E-202ENST00000602581 683 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL355598.1-201ENST00000604169 202 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL022154.1-201ENST00000604698 785 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL139286.2-201ENST00000606838 396 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 snoU13.31-201ENST00000607291 104 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL589743.7-201ENST00000612637 233 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL359547.2-201ENST00000615810 418 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AP003400.5-201ENST00000624827 617 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 AL157786.1-207ENST00000627771 695 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 U6.99-201ENST00000637524 83 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 MTND5P30-201ENST00000452896 1731 ntBASIC1.9□□□□□ -2.11
HOXA9P31269 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HOXA9P31269 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
HOXA9P31269 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HOXA9P31269 Y_RNA.33-201ENST00000362591 102 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 SNORD3E-201ENST00000362899 217 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 RNU6-371P-201ENST00000364283 108 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 SNORD115-7-201ENST00000365306 82 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HOXA9P31269 RNU6-166P-201ENST00000384371 107 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AL030996.1-201ENST00000411430 235 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXA9P31269 MTCYBP5-201ENST00000423752 1135 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXA9P31269 AC133104.1-201ENST00000429100 218 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXA9P31269 MTCO2P11-201ENST00000431069 680 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms