Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CLIP1P30622 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CLIP1P30622 RNA5SP331-201ENST00000364986 107 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.07□□□□□ -2.4
CLIP1P30622 RNU6-611P-201ENST00000384276 104 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 RNU6-296P-201ENST00000384608 107 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 RNU1-119P-201ENST00000391122 165 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.07□□□□□ -2.4
CLIP1P30622 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.07□□□□□ -2.4
CLIP1P30622 TIMM9P1-201ENST00000436122 256 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 GTF2IP13-201ENST00000438487 386 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 MTND1P33-201ENST00000446251 917 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 RNU6-1092P-201ENST00000516955 87 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 AC004217.3-201ENST00000551552 878 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 MIR3664-201ENST00000579074 99 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.07□□□□□ -2.4
CLIP1P30622 AC090578.1-201ENST00000604955 591 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 AC024257.5-201ENST00000612739 531 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 AC006001.4-201ENST00000622243 395 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 AC080188.3-201ENST00000624842 748 ntBASIC0.07□□□□□ -2.4
CLIP1P30622 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 SNX2P2-201ENST00000424553 323 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 AL096829.2-201ENST00000446582 742 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.06□□□□□ -2.4
CLIP1P30622 HIGD1AP6-201ENST00000521833 279 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.06□□□□□ -2.4
CLIP1P30622 AL158163.2-201ENST00000619110 700 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.06□□□□□ -2.4
CLIP1P30622 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.06□□□□□ -2.4
CLIP1P30622 AC017104.5-201ENST00000637647 639 ntBASIC0.06□□□□□ -2.4
CLIP1P30622 AC090625.1-201ENST00000357130 210 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 SNORD114-15-201ENST00000364687 72 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.05□□□□□ -2.4
CLIP1P30622 RNU6-152P-201ENST00000384037 107 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 MIR548B-201ENST00000385247 97 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AL133475.1-201ENST00000404414 305 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
CLIP1P30622 AC092423.1-201ENST00000430165 186 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 SUMO1P1-201ENST00000497904 306 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.05□□□□□ -2.4
CLIP1P30622 RNU6-678P-201ENST00000516832 109 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 RNU6-586P-201ENST00000517265 104 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AC109329.1-201ENST00000518744 317 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AP003392.2-201ENST00000527269 208 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.05□□□□□ -2.4
CLIP1P30622 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.05□□□□□ -2.4
CLIP1P30622 AL353765.1-201ENST00000605514 183 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AC117490.2-201ENST00000610042 594 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AL357075.2-201ENST00000614906 189 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 AC104820.1-201ENST00000624183 307 ntBASIC0.05□□□□□ -2.4
CLIP1P30622 RNU6-23P-201ENST00000363283 107 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 RNY4P3-201ENST00000365254 95 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 RNU2-7P-201ENST00000410794 178 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AL353621.1-201ENST00000418219 243 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 AC002429.1-201ENST00000437672 148 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 MTND2P4-201ENST00000445034 1004 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.04□□□□□ -2.4
CLIP1P30622 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 AC098869.1-201ENST00000481627 292 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
CLIP1P30622 AC025423.5-201ENST00000550230 219 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AL121579.1-201ENST00000555129 305 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC005951.2-201ENST00000576282 495 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 AC008993.2-201ENST00000631744 806 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC119751.3-201ENST00000399720 670 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC063976.4-201ENST00000421971 163 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AL589872.1-201ENST00000426602 288 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 AL669831.1-202ENST00000428504 417 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 SNRPEP9-201ENST00000436794 238 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 HSPE1P9-201ENST00000440046 311 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 snoU13.19-201ENST00000459148 104 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 SNORA68.3-201ENST00000515906 83 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.04□□□□□ -2.4
CLIP1P30622 AC130324.3-201ENST00000614165 542 ntBASIC0.04□□□□□ -2.4
CLIP1P30622 AC092447.10-201ENST00000620607 1652 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 AL391994.1-201ENST00000254724 282 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 U3.9-201ENST00000363823 204 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 RNA5SP493-201ENST00000364115 91 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 RNU6-1237P-201ENST00000384777 107 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 RNU6-360P-201ENST00000390944 104 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 MIR942-201ENST00000401111 86 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 MIR1302-8-201ENST00000408342 128 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 C8orf59P1-201ENST00000429930 303 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.03□□□□□ -2.41
CLIP1P30622 GAPDHP17-201ENST00000449858 1001 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.03□□□□□ -2.41
CLIP1P30622 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.41
CLIP1P30622 RNU6-581P-201ENST00000516214 105 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 RNA5SP255-201ENST00000516370 107 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 RNU6-165P-201ENST00000517170 99 ntBASIC0.03□□□□□ -2.41
CLIP1P30622 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.03□□□□□ -2.41
CLIP1P30622 ZNF705CP-201ENST00000530515 889 ntBASIC0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms