Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RAC1P9-201ENST00000604990 392 ntBASIC3.38□□□□□ -1.87
CD40P25942 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.38□□□□□ -1.87
CD40P25942 AL391261.4-201ENST00000616012 481 ntBASIC3.38□□□□□ -1.87
CD40P25942 AL591424.2-201ENST00000617023 128 ntBASIC3.38□□□□□ -1.87
CD40P25942 AL159153.1-201ENST00000619688 317 ntBASIC3.38□□□□□ -1.87
CD40P25942 Z75746.1-201ENST00000440243 2080 ntBASIC3.38□□□□□ -1.87
CD40P25942 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.38□□□□□ -1.87
CD40P25942 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.38□□□□□ -1.87
CD40P25942 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CD40P25942 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CD40P25942 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD40P25942 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40P25942 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD40P25942 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40P25942 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD40P25942 AL359837.1-201ENST00000381357 287 ntBASIC3.37□□□□□ -1.87
CD40P25942 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD40P25942 Y_RNA.452-201ENST00000384202 108 ntBASIC3.37□□□□□ -1.87
CD40P25942 AL590135.1-201ENST00000422215 156 ntBASIC3.37□□□□□ -1.87
CD40P25942 AC019205.3-201ENST00000424573 156 ntBASIC3.37□□□□□ -1.87
CD40P25942 USP9YP16-201ENST00000430287 407 ntBASIC3.37□□□□□ -1.87
CD40P25942 AL445584.1-201ENST00000431451 330 ntBASIC3.37□□□□□ -1.87
CD40P25942 AC016700.2-201ENST00000446011 156 ntBASIC3.37□□□□□ -1.87
CD40P25942 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.37□□□□□ -1.87
CD40P25942 USP9YP23-201ENST00000455085 407 ntBASIC3.37□□□□□ -1.87
CD40P25942 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40P25942 RPS27P26-201ENST00000494583 239 ntBASIC3.37□□□□□ -1.87
CD40P25942 AC025554.1-201ENST00000505641 188 ntBASIC3.37□□□□□ -1.87
CD40P25942 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.37□□□□□ -1.87
CD40P25942 SNORA31.16-201ENST00000516773 139 ntBASIC3.37□□□□□ -1.87
CD40P25942 SNORD59.2-201ENST00000516873 68 ntBASIC3.37□□□□□ -1.87
CD40P25942 AC109329.1-201ENST00000518744 317 ntBASIC3.37□□□□□ -1.87
CD40P25942 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40P25942 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.37□□□□□ -1.87
CD40P25942 AL442163.3-201ENST00000554110 156 ntBASIC3.37□□□□□ -1.87
CD40P25942 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.37□□□□□ -1.87
CD40P25942 RNU6-91P-201ENST00000607774 107 ntBASIC3.37□□□□□ -1.87
CD40P25942 AC096772.1-201ENST00000609146 564 ntBASIC3.37□□□□□ -1.87
CD40P25942 AC069200.1-201ENST00000609511 323 ntBASIC3.37□□□□□ -1.87
CD40P25942 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
CD40P25942 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40P25942 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD40P25942 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD40P25942 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CD40P25942 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD40P25942 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD40P25942 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD40P25942 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CD40P25942 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.36□□□□□ -1.87
CD40P25942 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD40P25942 Y_RNA.27-201ENST00000362540 103 ntBASIC3.36□□□□□ -1.87
CD40P25942 Y_RNA.471-201ENST00000384312 102 ntBASIC3.36□□□□□ -1.87
CD40P25942 RNU6-541P-201ENST00000384709 110 ntBASIC3.36□□□□□ -1.87
CD40P25942 MIR487A-201ENST00000385009 80 ntBASIC3.36□□□□□ -1.87
CD40P25942 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
CD40P25942 PTMAP2-201ENST00000397627 327 ntBASIC3.36□□□□□ -1.87
CD40P25942 HMGN2P31-201ENST00000432430 273 ntBASIC3.36□□□□□ -1.87
CD40P25942 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.36□□□□□ -1.87
CD40P25942 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.36□□□□□ -1.87
CD40P25942 OSTCP8-201ENST00000445117 448 ntBASIC3.36□□□□□ -1.87
CD40P25942 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
CD40P25942 AP000870.1-201ENST00000472927 406 ntBASIC3.36□□□□□ -1.87
CD40P25942 AC090525.1-201ENST00000479116 478 ntBASIC3.36□□□□□ -1.87
CD40P25942 SNORA67.7-201ENST00000516664 135 ntBASIC3.36□□□□□ -1.87
CD40P25942 AC022868.1-201ENST00000517767 391 ntBASIC3.36□□□□□ -1.87
CD40P25942 AC115990.1-201ENST00000526957 301 ntBASIC3.36□□□□□ -1.87
CD40P25942 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.36□□□□□ -1.87
CD40P25942 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.36□□□□□ -1.87
CD40P25942 AL161670.1-201ENST00000554348 137 ntBASIC3.36□□□□□ -1.87
CD40P25942 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.36□□□□□ -1.87
CD40P25942 AC090517.1-201ENST00000569307 266 ntBASIC3.36□□□□□ -1.87
CD40P25942 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
CD40P25942 AL078605.1-201ENST00000603529 500 ntBASIC3.36□□□□□ -1.87
CD40P25942 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
CD40P25942 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
CD40P25942 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.36□□□□□ -1.87
CD40P25942 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD40P25942 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.35□□□□□ -1.87
CD40P25942 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD40P25942 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD40P25942 RNU1-76P-201ENST00000362903 159 ntBASIC3.35□□□□□ -1.87
CD40P25942 SNORD114-19-201ENST00000363072 75 ntBASIC3.35□□□□□ -1.87
CD40P25942 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CD40P25942 U1.1-201ENST00000384101 164 ntBASIC3.35□□□□□ -1.87
CD40P25942 U8.10-201ENST00000384260 133 ntBASIC3.35□□□□□ -1.87
CD40P25942 RNU6-505P-201ENST00000384427 107 ntBASIC3.35□□□□□ -1.87
CD40P25942 RNA5SP354-201ENST00000391247 136 ntBASIC3.35□□□□□ -1.87
CD40P25942 AC009414.1-201ENST00000427200 443 ntBASIC3.35□□□□□ -1.87
CD40P25942 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.35□□□□□ -1.87
CD40P25942 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.35□□□□□ -1.87
CD40P25942 DYNLT3P2-201ENST00000442517 295 ntBASIC3.35□□□□□ -1.87
CD40P25942 AC073910.1-201ENST00000445047 438 ntBASIC3.35□□□□□ -1.87
CD40P25942 AL500522.2-201ENST00000448562 343 ntBASIC3.35□□□□□ -1.87
CD40P25942 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.35□□□□□ -1.87
CD40P25942 AC034114.1-201ENST00000520293 285 ntBASIC3.35□□□□□ -1.87
CD40P25942 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.35□□□□□ -1.87
CD40P25942 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.35□□□□□ -1.87
CD40P25942 AC087499.8-201ENST00000578406 226 ntBASIC3.35□□□□□ -1.87
CD40P25942 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.35□□□□□ -1.87
CD40P25942 AC137590.2-201ENST00000619709 240 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms