Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MIR412-201ENST00000362142 91 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 RNU6-1210P-201ENST00000363775 107 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 RNU4-1-201ENST00000363925 141 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 RNU6-1274P-201ENST00000384557 107 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 MRPL42P2-201ENST00000403169 426 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 MIR1262-201ENST00000408276 93 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 OR9R1P-201ENST00000412200 877 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 UBE2V1P10-201ENST00000414685 269 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 MTCO3P5-201ENST00000433620 714 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.76□□□□□ -2.13
KLHL41O60662 SNORA25.15-201ENST00000516487 89 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.76□□□□□ -2.13
KLHL41O60662 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.76□□□□□ -2.13
KLHL41O60662 MIR3683-201ENST00000580847 82 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 AC027807.2-201ENST00000616099 408 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 AL132822.1-201ENST00000617063 513 ntBASIC1.76□□□□□ -2.13
KLHL41O60662 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.76□□□□□ -2.13
KLHL41O60662 ZNF680P1-201ENST00000436625 1469 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 SNORD3E-201ENST00000362899 217 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 RNU6-39P-201ENST00000384344 107 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AC114491.1-201ENST00000416095 246 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AC007283.2-201ENST00000424739 197 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AL627311.1-201ENST00000431514 115 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.75□□□□□ -2.13
KLHL41O60662 USP9YP15-201ENST00000442391 422 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AL606517.1-201ENST00000446914 387 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AC006026.2-201ENST00000457376 180 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 MTCO2P29-201ENST00000465212 189 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AL121594.1-201ENST00000475906 575 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.75□□□□□ -2.13
KLHL41O60662 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
KLHL41O60662 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.75□□□□□ -2.13
KLHL41O60662 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.75□□□□□ -2.13
KLHL41O60662 ADI1P3-201ENST00000549509 470 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.75□□□□□ -2.13
KLHL41O60662 AC010928.2-201ENST00000588017 287 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AC024933.1-201ENST00000608472 348 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 AC092140.2-201ENST00000618027 521 ntBASIC1.75□□□□□ -2.13
KLHL41O60662 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KLHL41O60662 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KLHL41O60662 CBX3P1-201ENST00000325243 554 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
KLHL41O60662 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 RNU6-942P-201ENST00000363002 107 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 CBX3P9-201ENST00000402326 552 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC013410.2-201ENST00000422627 201 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 AL589872.1-201ENST00000426602 288 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 AC108078.2-201ENST00000510750 236 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 AC112206.3-201ENST00000514578 389 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 CR383656.8-201ENST00000549046 145 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 AC002400.1-201ENST00000569310 726 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 MTCYBP33-201ENST00000575007 1130 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC012065.4-201ENST00000602445 679 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 DEFB131E-202ENST00000602581 683 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC012409.4-201ENST00000612923 249 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AL050303.3-201ENST00000613704 284 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 U6.42-201ENST00000618440 107 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 AC009878.1-201ENST00000621819 340 ntBASIC1.74□□□□□ -2.13
KLHL41O60662 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KLHL41O60662 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
KLHL41O60662 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.74□□□□□ -2.13
KLHL41O60662 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 RNU5F-7P-201ENST00000363696 115 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.73□□□□□ -2.13
KLHL41O60662 RNU6-72P-201ENST00000384285 79 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 MIR10A-201ENST00000385043 110 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 CISD1P1-201ENST00000393907 327 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 AL593851.1-201ENST00000426171 157 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.73□□□□□ -2.13
KLHL41O60662 AC003989.2-201ENST00000440224 169 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 NDUFB1P2-201ENST00000449477 176 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 ZNF114P1-201ENST00000453500 292 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.73□□□□□ -2.13
KLHL41O60662 snoU13.14-201ENST00000459372 104 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 RNU6-123P-201ENST00000516163 102 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 Y_RNA.676-201ENST00000516393 96 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.73□□□□□ -2.13
KLHL41O60662 AP005660.1-201ENST00000522972 293 ntBASIC1.73□□□□□ -2.13
KLHL41O60662 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.73□□□□□ -2.13
KLHL41O60662 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.73□□□□□ -2.13
KLHL41O60662 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.73□□□□□ -2.13
KLHL41O60662 MIR548AC-201ENST00000585049 88 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms