Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU6-33P-201ENST00000384793 107 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AL451074.5-201ENST00000415894 435 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.89□□□□□ -1.95
LDB2O43679 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 AC091179.1-201ENST00000461606 579 ntBASIC2.89□□□□□ -1.95
LDB2O43679 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.89□□□□□ -1.95
LDB2O43679 RPL30P14-201ENST00000482744 348 ntBASIC2.89□□□□□ -1.95
LDB2O43679 RN7SL283P-201ENST00000489055 303 ntBASIC2.89□□□□□ -1.95
LDB2O43679 RNU6-1153P-201ENST00000516760 105 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 AC104576.1-201ENST00000524225 88 ntBASIC2.89□□□□□ -1.95
LDB2O43679 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.89□□□□□ -1.95
LDB2O43679 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
LDB2O43679 CYCSP39-201ENST00000565821 309 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.89□□□□□ -1.95
LDB2O43679 MIR5690-201ENST00000583739 73 ntBASIC2.89□□□□□ -1.95
LDB2O43679 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB2O43679 HSPE1P7-201ENST00000604681 321 ntBASIC2.89□□□□□ -1.95
LDB2O43679 RNU6-6P-201ENST00000606623 107 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AL627309.6-201ENST00000606857 840 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AC064836.2-201ENST00000609491 462 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AC090115.4-201ENST00000609970 188 ntBASIC2.89□□□□□ -1.95
LDB2O43679 MIR7106-201ENST00000612419 65 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AC084781.2-201ENST00000615568 161 ntBASIC2.89□□□□□ -1.95
LDB2O43679 AC099654.10-201ENST00000640395 161 ntBASIC2.89□□□□□ -1.95
LDB2O43679 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LDB2O43679 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LDB2O43679 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.89□□□□□ -1.95
LDB2O43679 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LDB2O43679 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDB2O43679 RNU6-1188P-201ENST00000363795 107 ntBASIC2.88□□□□□ -1.95
LDB2O43679 Y_RNA.394-201ENST00000383942 103 ntBASIC2.88□□□□□ -1.95
LDB2O43679 RNU6-851P-201ENST00000384565 107 ntBASIC2.88□□□□□ -1.95
LDB2O43679 MIR1302-11-201ENST00000408051 138 ntBASIC2.88□□□□□ -1.95
LDB2O43679 MIR1302-9-201ENST00000408365 138 ntBASIC2.88□□□□□ -1.95
LDB2O43679 MIR1302-10-201ENST00000408734 138 ntBASIC2.88□□□□□ -1.95
LDB2O43679 NDUFS5P4-201ENST00000412983 318 ntBASIC2.88□□□□□ -1.95
LDB2O43679 SNORD56-201ENST00000413522 71 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AL354751.2-201ENST00000415471 210 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AC099548.1-201ENST00000421443 426 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
LDB2O43679 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
LDB2O43679 RNU7-152P-201ENST00000458982 64 ntBASIC2.88□□□□□ -1.95
LDB2O43679 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
LDB2O43679 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDB2O43679 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB2O43679 AC107016.2-201ENST00000547968 190 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.88□□□□□ -1.95
LDB2O43679 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB2O43679 AC008121.1-201ENST00000603244 268 ntBASIC2.88□□□□□ -1.95
LDB2O43679 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LDB2O43679 MIR1302-2-201ENST00000607096 138 ntBASIC2.88□□□□□ -1.95
LDB2O43679 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AL161423.1-201ENST00000613700 262 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AC007742.2-201ENST00000618226 398 ntBASIC2.88□□□□□ -1.95
LDB2O43679 AC073308.1-201ENST00000623696 305 ntBASIC2.88□□□□□ -1.95
LDB2O43679 SCARNA4-202ENST00000625402 129 ntBASIC2.88□□□□□ -1.95
LDB2O43679 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB2O43679 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB2O43679 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LDB2O43679 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB2O43679 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDB2O43679 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB2O43679 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LDB2O43679 MTND5P7-201ENST00000413558 1798 ntBASIC2.87□□□□□ -1.95
LDB2O43679 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LDB2O43679 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LDB2O43679 SNORA80A-201ENST00000363922 136 ntBASIC2.87□□□□□ -1.95
LDB2O43679 Z98749.2-208ENST00000381646 500 ntBASIC2.87□□□□□ -1.95
LDB2O43679 RNU6-72P-201ENST00000384285 79 ntBASIC2.87□□□□□ -1.95
LDB2O43679 RNU6-43P-201ENST00000384302 107 ntBASIC2.87□□□□□ -1.95
LDB2O43679 RNU6-1106P-201ENST00000390845 107 ntBASIC2.87□□□□□ -1.95
LDB2O43679 EEF1A1P41-201ENST00000414667 207 ntBASIC2.87□□□□□ -1.95
LDB2O43679 MTCO2P12-201ENST00000427426 682 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AC093151.1-201ENST00000427711 313 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AL139132.1-201ENST00000431587 344 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.87□□□□□ -1.95
LDB2O43679 AC009969.1-201ENST00000438726 172 ntBASIC2.87□□□□□ -1.95
LDB2O43679 RNU7-187P-201ENST00000458985 68 ntBASIC2.87□□□□□ -1.95
LDB2O43679 Y_RNA.653-201ENST00000459091 95 ntBASIC2.87□□□□□ -1.95
LDB2O43679 RPL23AP45-201ENST00000476406 468 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AC083906.5-201ENST00000503722 328 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AC097462.2-201ENST00000504623 481 ntBASIC2.87□□□□□ -1.95
LDB2O43679 SCGB1D5P-201ENST00000515134 247 ntBASIC2.87□□□□□ -1.95
LDB2O43679 RNU6-1170P-201ENST00000515974 106 ntBASIC2.87□□□□□ -1.95
LDB2O43679 LINC00933-203ENST00000559812 219 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AC093249.1-201ENST00000567049 203 ntBASIC2.87□□□□□ -1.95
LDB2O43679 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LDB2O43679 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB2O43679 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB2O43679 AC124303.1-201ENST00000605703 360 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AL133215.3-201ENST00000609801 448 ntBASIC2.87□□□□□ -1.95
LDB2O43679 AL161629.2-201ENST00000615347 275 ntBASIC2.87□□□□□ -1.95
LDB2O43679 MIR6852-201ENST00000621699 66 ntBASIC2.87□□□□□ -1.95
LDB2O43679 KPNA2P1-201ENST00000458289 1591 ntBASIC2.87□□□□□ -1.95
LDB2O43679 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms