Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.17□□□□□ -2.22
UBFD1O14562 MTND2P29-201ENST00000438595 412 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 PTENP1-201ENST00000447117 1215 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.17□□□□□ -2.22
UBFD1O14562 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
UBFD1O14562 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.17□□□□□ -2.22
UBFD1O14562 AP001025.1-201ENST00000486139 332 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.17□□□□□ -2.22
UBFD1O14562 RNU6-965P-201ENST00000516721 96 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC107934.1-201ENST00000522215 217 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AP000763.2-201ENST00000540641 163 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.17□□□□□ -2.22
UBFD1O14562 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC096772.1-201ENST00000609146 564 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 uc_338.15-201ENST00000615470 191 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC092656.1-203ENST00000624134 423 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC090517.3-201ENST00000625170 141 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.17□□□□□ -2.22
UBFD1O14562 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.17□□□□□ -2.22
UBFD1O14562 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.17□□□□□ -2.22
UBFD1O14562 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
UBFD1O14562 SNORA40.19-201ENST00000390846 128 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 RPS20P2-201ENST00000402520 389 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 RNU2-41P-201ENST00000410991 178 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 AL365338.1-201ENST00000422282 858 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 CALM1P1-201ENST00000442082 433 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 RPL23AP35-201ENST00000451906 501 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.16□□□□□ -2.22
UBFD1O14562 RNA5SP57-201ENST00000459463 123 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 AL121594.1-201ENST00000475906 575 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 RNU6-1092P-201ENST00000516955 87 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.16□□□□□ -2.22
UBFD1O14562 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.16□□□□□ -2.22
UBFD1O14562 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.16□□□□□ -2.22
UBFD1O14562 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.16□□□□□ -2.22
UBFD1O14562 AL157392.4-201ENST00000609756 345 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 uc_338.12-201ENST00000616344 181 ntBASIC1.16□□□□□ -2.22
UBFD1O14562 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.16□□□□□ -2.22
UBFD1O14562 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UBFD1O14562 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
UBFD1O14562 OR4G1P-203ENST00000641984 1631 ntBASIC1.15□□□□□ -2.22
UBFD1O14562 RNU4-92P-201ENST00000363783 136 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AL355143.1-201ENST00000407101 841 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 RPS6P15-201ENST00000431996 751 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 Z73417.1-201ENST00000447373 778 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AL353752.1-201ENST00000454946 260 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 SNORD97-201ENST00000459187 142 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 PTP4A1P4-201ENST00000512479 322 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 RNU6-677P-201ENST00000516914 101 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AC068587.4-201ENST00000533893 186 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.15□□□□□ -2.23
UBFD1O14562 AL391001.1-201ENST00000602747 715 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AC078795.2-201ENST00000602835 1252 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AC016925.2-201ENST00000605108 242 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AL139022.2-201ENST00000606934 443 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 AC024940.5-201ENST00000622889 474 ntBASIC1.15□□□□□ -2.23
UBFD1O14562 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.23
UBFD1O14562 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
UBFD1O14562 RNU5E-1-201ENST00000362477 120 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 RNU6-743P-201ENST00000364151 106 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 RNU6-546P-201ENST00000383991 107 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 RNU6-622P-201ENST00000384272 103 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 RNU6-611P-201ENST00000384276 104 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 MIR122-201ENST00000385044 85 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 MIR613-201ENST00000385248 95 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 Y_RNA.623-201ENST00000411128 95 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AC009518.2-201ENST00000418056 731 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AL022400.1-201ENST00000423946 935 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.14□□□□□ -2.23
UBFD1O14562 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.14□□□□□ -2.23
UBFD1O14562 AL008629.1-201ENST00000438615 184 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.14□□□□□ -2.23
UBFD1O14562 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.14□□□□□ -2.23
UBFD1O14562 MTATP6P14-201ENST00000455189 673 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.14□□□□□ -2.23
UBFD1O14562 RPL31P58-201ENST00000469001 379 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.14□□□□□ -2.23
UBFD1O14562 AP003122.4-201ENST00000530980 758 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AL356057.1-201ENST00000533798 831 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.14□□□□□ -2.23
UBFD1O14562 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
UBFD1O14562 MIR3118-1-201ENST00000581787 76 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AC136443.5-201ENST00000603741 370 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 RNU4-5P-201ENST00000607255 135 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 AP002782.1-201ENST00000623107 614 ntBASIC1.14□□□□□ -2.23
UBFD1O14562 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
UBFD1O14562 SNORD114-22-201ENST00000365423 72 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 RNU6-395P-201ENST00000365662 106 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 RNU6-190P-201ENST00000384154 102 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 RNU6-72P-201ENST00000384285 79 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 MTND1P20-201ENST00000430341 950 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.13□□□□□ -2.23
UBFD1O14562 MTCO3P5-201ENST00000433620 714 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 GDI2P2-201ENST00000445131 608 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.13□□□□□ -2.23
UBFD1O14562 HMGB1P30-201ENST00000492455 606 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 AC112206.3-201ENST00000514578 389 ntBASIC1.13□□□□□ -2.23
UBFD1O14562 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms