Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC022559.1-201ENST00000520905 205 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 MIR4270-201ENST00000581799 70 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 MIR4737-201ENST00000583979 81 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC048347.1-201ENST00000624621 427 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 BX322639.1-202ENST00000423987 2213 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 SNORA72.2-201ENST00000365028 127 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 ELOCP19-201ENST00000411919 318 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC138623.1-201ENST00000418060 216 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 UQCRBP2-201ENST00000447827 297 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 RPS29P20-201ENST00000489592 171 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 IGKV1-32-201ENST00000519290 311 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AP001781.1-201ENST00000530977 207 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 RPL21P9-201ENST00000556149 474 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AL357075.2-201ENST00000614906 189 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC073308.1-201ENST00000623696 305 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 MTND5P35-201ENST00000557537 1720 ntBASIC3.69□□□□□ -1.82
SHISA3A0PJX4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHISA3A0PJX4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC006971.1-201ENST00000407916 4486 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 Y_RNA.179-201ENST00000363844 90 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 Y_RNA.217-201ENST00000364214 105 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RNA5SP240-201ENST00000365355 128 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 SNORD50.2-201ENST00000365465 70 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 SNORA1.3-201ENST00000384676 136 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RN7SKP177-201ENST00000410567 355 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RPL23AP26-201ENST00000412728 464 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 CYCSP48-201ENST00000417124 323 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 FTH1P6-201ENST00000430768 320 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RNU6-625P-201ENST00000459412 107 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 Y_RNA.641-201ENST00000459414 105 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC091021.1-201ENST00000468051 388 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RN7SL812P-201ENST00000493791 279 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AP006289.1-201ENST00000538089 277 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC091042.1-201ENST00000579213 173 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 MIR3136-201ENST00000583498 78 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RN7SL722P-201ENST00000617780 284 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RN7SL565P-201ENST00000618246 284 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 MIR7702-201ENST00000621931 59 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC021753.1-201ENST00000635724 168 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 MIR3199-2-201ENST00000636243 86 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AL773545.4-201ENST00000637262 310 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AL513478.4-201ENST00000641636 310 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC099654.7-201ENST00000635788 2127 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC008725.1-201ENST00000605123 2263 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 AC135776.4-201ENST00000624300 1904 ntBASIC3.68□□□□□ -1.82
SHISA3A0PJX4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHISA3A0PJX4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 RNU6-793P-201ENST00000384233 104 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 MIR613-201ENST00000385248 95 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 RNA5SP397-201ENST00000391323 118 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 MIR320B2-201ENST00000408479 138 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 RPL7AP25-201ENST00000423357 805 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AC019205.3-201ENST00000424573 156 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 RPL23AP3-201ENST00000453844 468 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 RPL30P12-201ENST00000474666 353 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 RPS29P26-201ENST00000477483 171 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AC006445.2-201ENST00000510061 472 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms