Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MTCO2P2-201ENST00000591258 225 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC108081.1-201ENST00000604358 221 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AL592221.1-201ENST00000605266 382 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC242628.1-201ENST00000606810 391 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC004009.2-201ENST00000623016 728 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 RNU6-1035P-201ENST00000384477 107 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 MRPL35P1-201ENST00000404272 572 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 MIR548L-201ENST00000408303 86 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.612-201ENST00000410717 95 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC002429.1-201ENST00000437672 148 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.24□□□□□ -2.37
MACF1Q9UPN3 SNORA25.16-201ENST00000516741 121 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 RNU6-711P-201ENST00000517255 106 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 ZNF92P3-201ENST00000596594 954 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC069304.2-201ENST00000605154 435 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 SNORA18.1-201ENST00000363418 128 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 MIR8485-201ENST00000401372 91 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 MIR1285-1-201ENST00000408593 84 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.24□□□□□ -2.37
MACF1Q9UPN3 SEPT2P1-201ENST00000419651 180 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 BPY2DP-201ENST00000422208 265 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 MTCO3P43-201ENST00000440974 771 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.24□□□□□ -2.37
MACF1Q9UPN3 HMGN2P9-201ENST00000476875 229 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 RN7SKP287-201ENST00000516546 266 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC011260.1-201ENST00000578420 472 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.24□□□□□ -2.37
MACF1Q9UPN3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0.24□□□□□ -2.37
MACF1Q9UPN3 SNORD115-2-201ENST00000362842 82 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 MIR4645-201ENST00000583158 77 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 BNIP3P27-201ENST00000599991 412 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC133104.2-201ENST00000615272 193 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 FRG1KP-201ENST00000623592 341 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL590396.2-201ENST00000636511 1041 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU6-690P-201ENST00000365242 106 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL159169.1-201ENST00000421119 127 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 OR51B8P-201ENST00000449892 769 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU7-94P-201ENST00000459576 63 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL359704.1-201ENST00000411586 781 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 MTCO1P20-201ENST00000425366 358 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC023512.1-201ENST00000444513 499 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RPL23AP62-201ENST00000463396 453 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC021171.1-201ENST00000603137 706 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC138649.5-201ENST00000637456 137 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.434-201ENST00000384090 100 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU6-800P-201ENST00000384473 103 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU6-519P-201ENST00000410590 108 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC133104.1-201ENST00000429100 218 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL392003.1-201ENST00000434394 243 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL031183.1-201ENST00000457667 207 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU7-134P-201ENST00000458997 64 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 SNORD97-201ENST00000459187 142 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 SYPL1P1-201ENST00000473622 768 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 uc_338.20-201ENST00000621563 178 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL049777.1-201ENST00000622740 518 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 SNORD115-33-201ENST00000363723 82 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 SNORD115-42-201ENST00000364273 82 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU6-424P-201ENST00000384367 105 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 NDUFS5P3-201ENST00000450668 321 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 COX6CP6-201ENST00000490840 228 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RN7SKP5-201ENST00000517045 272 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC109329.1-201ENST00000518744 317 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC100767.1-201ENST00000528178 123 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC107918.3-201ENST00000533272 382 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AL451049.1-201ENST00000608672 497 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 AC009032.1-201ENST00000617574 431 ntBASIC0.23□□□□□ -2.37
MACF1Q9UPN3 RNU6-1169P-201ENST00000363537 103 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6-188P-201ENST00000364207 107 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RNU6-1034P-201ENST00000365335 101 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 SNORA24.1-201ENST00000384401 135 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL139098.1-201ENST00000407291 389 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 RAB11AP1-201ENST00000442978 646 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 Y_RNA.678-201ENST00000516408 96 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL359212.1-201ENST00000556608 614 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 AL355472.4-201ENST00000610233 626 ntBASIC0.22□□□□□ -2.37
MACF1Q9UPN3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms