Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU5F-8P-201ENST00000515941 111 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AL590705.4-201ENST00000532209 134 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC006199.1-201ENST00000548728 219 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC009163.5-201ENST00000575421 637 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 MIR5047-201ENST00000579212 100 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AL356157.2-201ENST00000605122 111 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC008669.1-201ENST00000565823 2178 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.389-201ENST00000383924 113 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.455-201ENST00000384230 98 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 RNU6-101P-201ENST00000410323 104 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 EIF1AXP1-201ENST00000419267 435 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC092423.1-201ENST00000430165 186 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 MED28P2-201ENST00000475771 317 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 RPL30P10-201ENST00000488148 337 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 RN7SKP18-201ENST00000516005 275 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 RNU6-1137P-201ENST00000517073 99 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC090877.1-201ENST00000561418 344 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 AC084757.4-201ENST00000616350 526 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 U6.98-201ENST00000637157 84 ntBASIC4.22□□□□□ -1.73
DDX41Q9UJV9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX41Q9UJV9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.527-201ENST00000384573 102 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 MIR183-201ENST00000384958 110 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AL356057.3-201ENST00000402607 340 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 RPS29P4-201ENST00000414733 161 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AL714022.1-201ENST00000439897 151 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AL161651.1-201ENST00000440882 223 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AC097462.2-201ENST00000504623 481 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AC110768.1-201ENST00000509222 400 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 RNU4-77P-201ENST00000516692 156 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AC091144.1-201ENST00000519573 138 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX41Q9UJV9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 AC032011.1-201ENST00000611703 1549 ntBASIC4.21□□□□□ -1.74
DDX41Q9UJV9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RNU6-525P-201ENST00000363685 104 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 HLFP1-201ENST00000402375 499 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC245291.1-201ENST00000419501 328 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RPS15AP5-201ENST00000436276 388 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC243964.1-201ENST00000441814 261 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AL513124.1-201ENST00000450410 614 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC079354.2-201ENST00000453523 154 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AL441985.1-201ENST00000457727 251 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RN7SL293P-201ENST00000481765 281 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RNU7-175P-201ENST00000515915 61 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RNA5SP208-201ENST00000516156 78 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RNU6-1046P-201ENST00000516538 107 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 ACA59.2-201ENST00000517061 156 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 MIR5701-3-201ENST00000578890 82 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 MIR5701-1-201ENST00000585138 82 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 AC016727.2-201ENST00000603988 621 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 MIR5701-2-201ENST00000615634 82 ntBASIC4.2□□□□□ -1.74
DDX41Q9UJV9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX41Q9UJV9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 RNU6-142P-201ENST00000384019 107 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AL353752.1-201ENST00000454946 260 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 RPS26P21-201ENST00000475397 348 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AL049830.2-201ENST00000480072 201 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms