Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AL353621.1-201ENST00000418219 243 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 AL590632.1-201ENST00000424289 371 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.66□□□□□ -1.82
USP25Q9UHP3 MYL8P-204ENST00000431574 518 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 AC022493.1-201ENST00000492984 337 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.66□□□□□ -1.82
USP25Q9UHP3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.66□□□□□ -1.82
USP25Q9UHP3 AC008716.1-201ENST00000511084 513 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 AC026782.1-201ENST00000512952 449 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 AC026371.1-201ENST00000551867 419 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.66□□□□□ -1.82
USP25Q9UHP3 MIR4506-201ENST00000584693 77 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 U3.45-201ENST00000607547 219 ntBASIC3.66□□□□□ -1.82
USP25Q9UHP3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP25Q9UHP3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.66□□□□□ -1.82
USP25Q9UHP3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
USP25Q9UHP3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.82
USP25Q9UHP3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 RNU6-639P-201ENST00000384074 107 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 RNU6-214P-201ENST00000384130 107 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 RPS29P4-201ENST00000414733 161 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AL645568.3-201ENST00000433683 316 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 RPS15AP5-201ENST00000436276 388 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AL078601.1-201ENST00000444542 271 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC097473.1-201ENST00000508142 408 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC096745.1-201ENST00000509945 370 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 RNU1-54P-201ENST00000517181 120 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC069113.1-201ENST00000517763 267 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC018462.2-201ENST00000605375 395 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 MIR6128-201ENST00000615528 109 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 AC012314.7-201ENST00000619693 93 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 MIR3199-2-201ENST00000636243 86 ntBASIC3.65□□□□□ -1.83
USP25Q9UHP3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP25Q9UHP3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP25Q9UHP3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 SNORD62.1-201ENST00000362541 86 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 RNA5SP50-201ENST00000363731 107 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 MIR767-201ENST00000390228 109 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 RNU2-3P-201ENST00000410144 191 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 RN7SKP58-201ENST00000411010 305 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 SNORD5.1-201ENST00000458800 75 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC025423.5-201ENST00000550230 219 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC025281.1-201ENST00000567026 265 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 MIR3922-201ENST00000585192 84 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 RMST_4.1-201ENST00000616886 107 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 AL031601.2-202ENST00000622650 282 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 AC110079.1-202ENST00000635213 138 ntBASIC3.64□□□□□ -1.83
USP25Q9UHP3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP25Q9UHP3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
USP25Q9UHP3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 RNU6-525P-201ENST00000363685 104 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 AC117470.1-201ENST00000381974 330 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 SNORA75B-201ENST00000384053 137 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RNU6-166P-201ENST00000384371 107 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 SNORA75.6-201ENST00000391318 127 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RN7SKP123-201ENST00000410732 291 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 BMS1P22-201ENST00000414726 313 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 AC018865.2-201ENST00000423631 129 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 HMGB1P30-201ENST00000492455 606 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RPS27P26-201ENST00000494583 239 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 MTND3P25-201ENST00000509243 135 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RNA5SP385-201ENST00000515947 110 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RN7SKP43-201ENST00000516173 320 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RN7SKP282-201ENST00000516824 299 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 RNU6-988P-201ENST00000519081 107 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 LINC00933-203ENST00000559812 219 ntBASIC3.63□□□□□ -1.83
USP25Q9UHP3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.63□□□□□ -1.83
USP25Q9UHP3 AC010653.1-201ENST00000571108 881 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms